Pairwise Alignments

Query, 617 a.a., type VI secretion system tip protein VgrG from Dickeya dadantii 3937

Subject, 658 a.a., type IV secretion protein Rhs from Pseudomonas simiae WCS417

 Score =  316 bits (809), Expect = 2e-90
 Identities = 199/597 (33%), Positives = 297/597 (49%), Gaps = 19/597 (3%)

Query: 9   FTVKVGALPDTTFAVVDFELSEALNQPFALSLNLASSQPGIDFGAVLDQPCELLVWYEGE 68
           FT+ +   P + F V +F   E+++QP+   + L S QP +D  ++L +   L     G 
Sbjct: 10  FTLTLDGEP-SEFKVFEFSGIESISQPYRFDIELVSEQPDLDLESLLHRQVYLGFDDRG- 67

Query: 69  LQRRVSGIVSRFAQGDTGFRRTRYQAEVRPALWRLGLRTNARIFQTQKPDAIISTLLEEA 128
             R V G+V R AQGD+G R TRYQ  + P L  LG  ++ RIFQ +    I++ +LE  
Sbjct: 68  --RGVHGLVYRMAQGDSGRRLTRYQMTLVPQLAYLGHSSHQRIFQHKTVPQIVAQVLEGQ 125

Query: 129 GITD--YAFALRHDHAVREYCVQYRESDLAFINRLAAEEGLFYFHEFEAGKHRVVFADDA 186
           GI    + F L   +  REYCVQ+ E+DLAFI RL AE G+ Y  +  +  H +VF DD 
Sbjct: 126 GIQRDRFEFRLSGTYPEREYCVQFGETDLAFIQRLCAELGIHYHFQHSSAGHLLVFGDDQ 185

Query: 187 GALAKG-PELFFNLATQGLSEGAYVRRFRYAEAVSTAEVALKDYSFKTPAYGLLHNKMSS 245
               +  P   +   +  +++   ++RF       T  V L+DY F+ P+  L     S 
Sbjct: 186 TVFVQADPPTPYTPGSGMVADTPVIKRFAVQVQARTTGVNLRDYDFRKPSLAL----ESE 241

Query: 246 ELAHQRESYQHFDYPGRFKQDPSGKAFTGYRLDALRAGAMTGNGESNAAELRPGSSFTLT 305
               Q    +   YPG F     GK      L+  R+      G  +   L  G    L 
Sbjct: 242 VTGEQLPPLEAQVYPGHFNDRAHGKYLAQRGLERHRSDYRVARGSGDEPALGSGRFLKLA 301

Query: 306 EHPNPAFNLAWQVVAVAHSGQQPQALEEE----SGGE-PTTLSNSFEVVKATTTWRAALP 360
            HP   +N  W V  V H G QPQ LEE     +GG+      N F        +R  +P
Sbjct: 302 GHPREDWNDLWLVTHVTHEGLQPQVLEESVTEVAGGDFRQGYRNEFSATPWDAIFRPPMP 361

Query: 361 Y--KPMVDGPQIATVVGPAGEEIYCDEFGRVKLQFPWDRYGASDDQSSCWVRVSQGWAGG 418
              +P + G Q A V GPA  EI+CDE+GRVK+Q  WDR G  +D SSCW+RV+ GWA  
Sbjct: 362 EQPRPTIAGYQNAVVTGPADSEIHCDEYGRVKVQLVWDRDGEHNDHSSCWLRVASGWAHD 421

Query: 419 QYGLIAIPRIGHEVVVSFLEGDPDQPIVTGRTFHATNPSPYPLPASKTRTSLRT-STHKG 477
           +YG + IPR+G EV+V F+ GD D P+V G   +A    P  LPA KTR+  R+ S+  G
Sbjct: 422 RYGSVLIPRVGMEVLVGFVNGDMDMPLVMGCLPNAATQVPLDLPADKTRSVFRSQSSPGG 481

Query: 478 AGFNELRFEDQAGQEEVFIHAQKDMNTVVLNNRSTSVNASHTENVGGDQTVVVQHNQTVS 537
            G+NELR ED+ G EE+++ AQ+D    VL++   +V+      + G++  +   N+   
Sbjct: 482 GGYNELRIEDRKGAEEIYLRAQRDWTQHVLHDLRVNVDGESHHELQGEELRITHGNRLTD 541

Query: 538 VKENQVTEIQGEQTVAVTKNRHTTVDDNESLQVKKNIAIQSQSGDVLIATAGGFIAI 594
           +K++    + G + V   +        +  ++    + IQ+    + +   G F ++
Sbjct: 542 LKQDDHLMVGGSRQVRAGQTIQIGAGQSVVIEGGATVTIQAGGQSITLCAGGIFSSV 598