Pairwise Alignments

Query, 336 a.a., DNA polymerase III subunit delta' from Dickeya dadantii 3937

Subject, 334 a.a., DNA polymerase III, delta prime subunit from Escherichia coli BL21

 Score =  361 bits (926), Expect = e-104
 Identities = 187/333 (56%), Positives = 234/333 (70%), Gaps = 2/333 (0%)

Query: 1   MEWYPWLNAPYRQLLASHQAERGHHALLLHAIDGMGDASLAYAFSRWLLCRQPDGAKSCG 60
           M WYPWL   + +L+AS+QA RGHHALL+ A+ GMGD +L YA SR+LLC+QP G KSCG
Sbjct: 1   MRWYPWLRPDFEKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQGHKSCG 60

Query: 61  RCHSCELMSAGTHPDWHTLSPEKGKHSLGVDAVRDVLEPVYQRSRQGGAKVVWLPQAESL 120
            C  C+LM AGTHPD++TL+PEKGK++LG+DAVR+V E + + +R GGAKVVW+  A  L
Sbjct: 61  HCRGCQLMQAGTHPDYYTLAPEKGKNALGIDAVREVTEKLNEHARLGGAKVVWVTDAALL 120

Query: 121 TEAAANALLKTLEEPPAQTYFLLGCRDPGRLLATMRSRCLHLYLDVPTESQGMQWLRGRG 180
           T+AAANALLKTLEEPPA+T+F L  R+P RLLAT+RSRC   YL  P E   + WL    
Sbjct: 121 TDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVTWLSREV 180

Query: 181 HDDDLALQTALRLAAGAPLAAEALLQPDSWKARQAVCQQLAQSLQSGDALALLPVLNHED 240
                AL  ALRL+AG+P AA AL Q D+W+AR+ +CQ LA S+ SGD  +LL  LNHE 
Sbjct: 181 TMSQDALLAALRLSAGSPGAALALFQGDNWQARETLCQALAYSVPSGDWYSLLAALNHEQ 240

Query: 241 ADRRIHWVSTLFLDALKWRHQAADRRTNQDQAALVAQLASQPGEARLHHGLRRWLHCRHQ 300
           A  R+HW++TL +DALK RH  A + TN D   LVA+LA+    +RL   L    H R Q
Sbjct: 241 APARLHWLATLLMDALK-RHHGAAQVTNVDVPGLVAELANHLSPSRLQAILGDVCHIREQ 299

Query: 301 LLSVTGVNRELLLTELLLAWESLLS-SPTLPAP 332
           L+SVTG+NRELL+T+LLL  E  L     LP P
Sbjct: 300 LMSVTGINRELLITDLLLRIEHYLQPGVVLPVP 332