Pairwise Alignments

Query, 681 a.a., exodeoxyribonuclease V subunit alpha from Dickeya dadantii 3937

Subject, 691 a.a., ATP-dependent DNA helicase and dsDNA/ssDNA exonuclease, ssDNA endonuclease from Pseudomonas putida KT2440

 Score =  666 bits (1719), Expect = 0.0
 Identities = 375/683 (54%), Positives = 468/683 (68%), Gaps = 34/683 (4%)

Query: 8   ELTLLLDQWVECGWLRELDRALVRFLHQECPEASSLLLLGAALVSYQLGRGHVCLDLDAT 67
           +L  LLD+WVE GWLR LDRA V FL +  P +  LLLL AAL S+QLG GHVCLDL  T
Sbjct: 29  DLLQLLDRWVERGWLRALDRAFVSFLEERAPGSDPLLLLAAALASHQLGHGHVCLDLQQT 88

Query: 68  LADSGFSLALPPEGDRSENRKIARPAEVLAGVTLSAWQAALQQPQLVSSGEG----STPL 123
           LA+  F+L+LPPEGD      +  P+++LA + L+AW   +    LV++G+     + PL
Sbjct: 89  LAEPDFALSLPPEGDALIG-PLLLPSQLLANLDLNAWLQRISASPLVAAGDTPGQQARPL 147

Query: 124 VLVGARLYLRRYWRYEQDVRHAITQQLTQNDALRAAITPAALRQRLDALFPAAA-AGSAN 182
           V  G RLYLRRYW YE+ +  A+ Q+L+Q +A      PA L +RL  LF   A AG  +
Sbjct: 148 VRSGERLYLRRYWSYERRIDQALRQRLSQAEA-----PPADLPERLAQLFEGGAPAGQVD 202

Query: 183 WQKLACALAAGSAFSIITGGPGTGKTTTVVKLLALLQSLALEQHGKPLRIRLAAPTGKAA 242
           WQKLACALA  + FSIITGGPGTGKTTTVV+LLALLQ+ A+EQ G+PLRIRLAAPTGKAA
Sbjct: 203 WQKLACALATRAGFSIITGGPGTGKTTTVVRLLALLQAPAVEQ-GRPLRIRLAAPTGKAA 261

Query: 243 ARLNESIAGAIAGLTLDGLAQGEAIREQINSEVVTLHRLLGSRPDTRHFRHHADNPLMLD 302
           ARL ESI     G  ++ L     +R QI +EV T+HRLLGSRP +RHFRHHA NPL LD
Sbjct: 262 ARLTESI-----GQQVERLQVSAEVRGQIPTEVSTVHRLLGSRPGSRHFRHHAGNPLPLD 316

Query: 303 VLVVDEASMVDLEMMAALLAAMPARSRLILLGDKDQLASVEAGALMGELCQRAAQGHYLP 362
           VLVVDEASM+DLEMMA LL A+P R+RL+LLGDKDQLASVEAGA++G+LC+ A +G Y P
Sbjct: 317 VLVVDEASMIDLEMMANLLDALPPRARLVLLGDKDQLASVEAGAVLGDLCRDAEEGFYSP 376

Query: 363 QTRDWLREVAGDAPDDSLL---DPQGSALDQSIAMLRHSYRFGADSGIGQLAEAVNAGDA 419
            T  WL++V+G++   S L   D Q   L Q + MLR S RFG  SGIGQLA  VN  DA
Sbjct: 377 ATAAWLQQVSGESLAGSGLKAGDEQRHPLAQQVVMLRFSRRFGEGSGIGQLARLVNRQDA 436

Query: 420 AALASVWRQGYADLARLTLTANDNRALREWVIDGAADRFGAQPAAAAPVGYGDYLRRMAS 479
            A  ++     AD+  L+L    +RA    ++D      G       P GY  YLR +  
Sbjct: 437 HAARNLLAAPPADVHSLSLKHEQDRAFDRLLLD------GLNRGTDGPQGYRSYLRTLGR 490

Query: 480 TRPALTAPQSE--FDMWAAQILDAFGQFQLLCALRNGPWGVDSMNERIAQLLYRDGLLAA 537
            RPAL     +  ++ WA ++L +F  FQLLCA+R G WGV+ +NER+A++L+  GL+ +
Sbjct: 491 YRPALDTAFDDPAWEQWAGKVLRSFEDFQLLCAVRRGAWGVEGLNERVARVLHNAGLIDS 550

Query: 538 WQGWYPGRPVMVTRNDYSQRLMNGDIGITLQVPLLQPDGSWGWATRVAFPAGDGSSGIRW 597
            Q WY GRPV+VTRNDY   LMNGDIGI L++    PD       RVAFP  DGS G+R+
Sbjct: 551 QQPWYEGRPVLVTRNDYGLGLMNGDIGIALRL----PDEHGQPLLRVAFPRNDGSGGVRF 606

Query: 598 VLPGRLSAVETVFAMTVHKSQGSEFAHTALLLPDSLSPILTRELVYTGITRAKHAFSLGC 657
           VLP RL+ VETVFAMTVHKSQGSEF+HTAL+LP++L+P+LT+ELVYTGITRAKH FSL  
Sbjct: 607 VLPSRLNEVETVFAMTVHKSQGSEFSHTALVLPEALNPVLTKELVYTGITRAKHCFSL-- 664

Query: 658 VGEHSTVLAEAVGRRVLRVSGLV 680
           V     +  EAV R+V R+SGL+
Sbjct: 665 VEPRQGIFEEAVARKVRRISGLM 687