Pairwise Alignments

Query, 681 a.a., exodeoxyribonuclease V subunit alpha from Dickeya dadantii 3937

Subject, 616 a.a., exodeoxyribonuclease V subunit alpha from Serratia liquefaciens MT49

 Score =  434 bits (1117), Expect = e-126
 Identities = 298/677 (44%), Positives = 384/677 (56%), Gaps = 77/677 (11%)

Query: 12  LLDQWVECGWLRELDRALVRFLHQ-ECPEASSLLLLGAALVSYQLGRGHVCLDLDATLAD 70
           LL+Q    G LR LD    R +   + P+    +LL AA +S + G GHVCL L+  L +
Sbjct: 4   LLEQAQALGVLRPLDLQFARVVATADQPD----ILLAAACLSAEAGAGHVCLMLEQLLPE 59

Query: 71  SGFSLALPPEGDRSENRKIARPAEVLAGVT-LSAWQAALQQPQLVSSGEGSTPLVLVGAR 129
           + F    P         ++A+   + AG   L+ WQ  L     V  G  + P+VL   R
Sbjct: 60  NLFDGRQP---------ELAQAVWLAAGQPDLTDWQQRLSASAAVGDGSTAMPMVLQQQR 110

Query: 130 LYLRRYWRYEQDVRHAITQQLTQNDALRAAITPAALRQRLDALFPAAAAGSANWQKLACA 189
           LYL+R W+ E +V   I+      D+L  A+  A LR  LD LF   A    +WQK+A A
Sbjct: 111 LYLQRMWQNEGEVADFIS-----GDSLHQAVEEAELRTILDQLF-GEATDEPDWQKIAAA 164

Query: 190 LAAGSAFSIITGGPGTGKTTTVVKLLALLQSLALEQHGKPLRIRLAAPTGKAAARLNESI 249
           +AA    ++I+GGPGTGKTTTV KLLA L  LA    G+ LRI+LAAPTGKAAARL ES+
Sbjct: 165 VAATRRIAVISGGPGTGKTTTVAKLLAALVQLA---EGRRLRIQLAAPTGKAAARLTESL 221

Query: 250 AGAIAGLTLDGLAQGEAIREQINSEVVTLHRLLGSRPDTRHFRHHADNPLMLDVLVVDEA 309
             A   L L         R    +E  TLHRLLG++P+++  R+H  NPL LDVLVVDEA
Sbjct: 222 GSAGRQLALT-----PEQRALFPTEASTLHRLLGAQPNSQRMRYHRGNPLHLDVLVVDEA 276

Query: 310 SMVDLEMMAALLAAMPARSRLILLGDKDQLASVEAGALMGELCQRAAQGHYLPQTRDWLR 369
           SMVDL MMA L+AA+PA++R+I LGD+DQLASVEAGA++G++C+ A QG+ + +  + L 
Sbjct: 277 SMVDLPMMARLIAALPAQARVIFLGDRDQLASVEAGAVLGDICRFAEQGYSVARA-EQLS 335

Query: 370 EVAGDAPDDSLLDPQGSALDQSIAMLRHSYRFGADSGIGQLAEAVNAGDAAALASVWRQG 429
            + G        + + +  D S+ +LR SYRF A+SGIGQLA AVNAGD    A      
Sbjct: 336 RLTGCLLQGQSAEAEAAVRD-SLCLLRKSYRFDANSGIGQLAFAVNAGDGKKAAWALGGN 394

Query: 430 YADLARLTLT-ANDNRALREWVIDGAADRFGAQPAAAAPVGYGDYLRRMASTRPALTAPQ 488
           ++D+    L    D +AL +                A   GY DYL+++A+   A+T   
Sbjct: 395 FSDVTGHPLAETQDYQALLD----------------ACVAGYRDYLQQVATGADAVT--- 435

Query: 489 SEFDMWAAQILDAFGQFQLLCALRNGPWGVDSMNERIAQLLYRDGLLAAWQG----WYPG 544
                    IL AFGQFQ+LCALR GP+G+  +NERI   L R GL+    G    WYPG
Sbjct: 436 ---------ILAAFGQFQVLCALREGPFGIAGLNERIETGLQRAGLIQRKPGTAGRWYPG 486

Query: 545 RPVMVTRNDYSQRLMNGDIGITLQVPLLQPDGSWGWATRVAFPAGDGSSGIRWVLPGRLS 604
           RPVM+ RND +  L NGDIGI L+              RV F   DGS  I+ V P RL 
Sbjct: 487 RPVMIGRNDSALGLFNGDIGIALR--------DESGELRVHFQLPDGS--IKSVQPSRLP 536

Query: 605 AVETVFAMTVHKSQGSEFAHTALLLPDSLSPILTRELVYTGITRAKHAFSLGCVGEHSTV 664
           A ET +AMTVHKSQGSEF HT L+LP+   P+LTRELVYT ITRA+   SL        V
Sbjct: 537 AHETAYAMTVHKSQGSEFDHTVLVLPNHFLPVLTRELVYTAITRARKQLSLYAT---EAV 593

Query: 665 LAEAVGRRVLRVSGLVE 681
           L  A+     R SGL E
Sbjct: 594 LLRAIRTPTQRRSGLAE 610