Pairwise Alignments

Query, 681 a.a., exodeoxyribonuclease V subunit alpha from Dickeya dadantii 3937

Subject, 611 a.a., Exodeoxyribonuclease V alpha chain (EC 3.1.11.5) from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  420 bits (1079), Expect = e-121
 Identities = 273/637 (42%), Positives = 360/637 (56%), Gaps = 76/637 (11%)

Query: 46  LGAALVSYQLGRGHVCLDLDA-TLADSGFSLALPPEGDRSENRKIARPAEVLAGVTLSAW 104
           L AAL+S+  G GHVCL L   TL +    L +               A +    T   W
Sbjct: 37  LAAALLSHDAGEGHVCLPLSRLTLTEEAHPLLV---------------ACISETATPIDW 81

Query: 105 QAALQQPQLVSSGEGSTPLVLVGARLYLRRYWRYEQDVRHAITQQLTQNDALRAAITPAA 164
           +  L     VS G+   PL+L G RLYL R W  E+ V     +    N A+  A+    
Sbjct: 82  KKRLLASAAVSCGDSPAPLILCGERLYLNRMWCNERTVARFFNEV---NQAI--AVDEDQ 136

Query: 165 LRQRLDALFPAAAAGSANWQKLACALAAGSAFSIITGGPGTGKTTTVVKLLALLQSLALE 224
           L + LDALFP       NWQK+A A+A     S+I+GGPGTGKTTTV KLLA L  +A  
Sbjct: 137 LSRILDALFPPT--DEVNWQKVAAAVALTRRISVISGGPGTGKTTTVAKLLAALIQMA-- 192

Query: 225 QHGKPLRIRLAAPTGKAAARLNESIAGAIAGLTLDGLAQGEAIREQINSEVVTLHRLLGS 284
             G+  RIRLAAPTGKAAARL ES+  A+  L L      +A +++I  +  TLHRLLG+
Sbjct: 193 -DGERCRIRLAAPTGKAAARLTESLGAALRQLPLT-----DAQKKRIPEDASTLHRLLGA 246

Query: 285 RPDTRHFRHHADNPLMLDVLVVDEASMVDLEMMAALLAAMPARSRLILLGDKDQLASVEA 344
           +P ++  RHHA NPL LDVLVVDEASM+DL MM+ L+ ++P   R+I LGD+DQLASVEA
Sbjct: 247 QPGSQRLRHHAGNPLHLDVLVVDEASMIDLPMMSRLIDSLPPHGRVIFLGDRDQLASVEA 306

Query: 345 GALMGELCQRAAQGHYLPQTRDWLREVAGDAPDDSLLDPQGSALDQSIAMLRHSYRFGAD 404
           GA++G++C     G    + R   R      P  +    Q ++L  S+ +L+ SYRFG+D
Sbjct: 307 GAVLGDICAYVNAGFTAERARQLSRLTGSAIPAGA--GTQAASLRDSLCLLQKSYRFGSD 364

Query: 405 SGIGQLAEAVNAGDAAALASVWRQGYADLARLTLTANDNRALREWVIDGAADRFGAQPAA 464
           SGIG+LA A+N GD +A+ +V++QG++D+ + TL ++D+ A       G  D        
Sbjct: 365 SGIGKLAAAINCGDRSAIQAVFQQGFSDIEKRTLQSSDDYA-------GMLDE------- 410

Query: 465 AAPVGYGDYLRRMASTRPALTAPQSEFDMWAAQILDAFGQFQLLCALRNGPWGVDSMNER 524
            A  GYG YLR +         P++        IL AF ++QLLCALR GP+GV  +N+R
Sbjct: 411 -ALAGYGRYLRLLHEK----ATPEA--------ILQAFNEYQLLCALREGPFGVRGLNDR 457

Query: 525 IAQLLYRDGLLA--AWQGWYPGRPVMVTRNDYSQRLMNGDIGITLQVPLLQPDGSWGWAT 582
           I Q + +   +       WY GRPVM+ RND +  L NGDIGI L           G   
Sbjct: 458 IEQAMVQQRKIQRHPHSRWYEGRPVMIARNDSALGLFNGDIGIAL---------DRGQGL 508

Query: 583 RVAFPAGDGSSGIRWVLPGRLSAVETVFAMTVHKSQGSEFAHTALLLPDSLSPILTRELV 642
           RV F   DG+  I+ V P RL   +T +AMTVHKSQGSEF H AL+LP   SP++TRELV
Sbjct: 509 RVWFVMPDGT--IKSVQPSRLPEHDTTWAMTVHKSQGSEFDHAALILPSQRSPVVTRELV 566

Query: 643 YTGITRAKHAFSLGCVGEHSTVLAEAVGRRVLRVSGL 679
           YT +TRA+   SL        +LA A+  R  R SGL
Sbjct: 567 YTAVTRARRRLSLYA---DERILAGAIVTRTERRSGL 600