Pairwise Alignments

Query, 284 a.a., ABC transporter permease subunit from Dickeya dadantii 3937

Subject, 303 a.a., Putrescine transport system permease protein PotH (TC 3.A.1.11.2) from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score = 74.3 bits (181), Expect = 3e-18
 Identities = 63/244 (25%), Positives = 114/244 (46%), Gaps = 15/244 (6%)

Query: 22  MGAVLGMAFSQSLGFFNFAGDSGLSLRFWQTMLTDEQLWRSFFYSARIALVSALLSAALA 81
           +  +L + +   L  F     + L    ++T+  D  L RS +Y    AL +A+L  A+ 
Sbjct: 54  VSGILSLKYENYLAIFRTEEGAPL----FRTLYIDAYL-RSIWY----ALCTAVLCLAIG 104

Query: 82  YPLAIWL-RKPFPGAVTLRALLKAPLLVPGLTAAFLFVNFISYQGFLNVAMLRLGLTERP 140
           YP A ++ R P      L  ++  P     L   + +   ++ QG LN  ++ +GL   P
Sbjct: 105 YPFAYFIARSPASIRPALLLMVMLPFWTSFLLRVYAWKGILADQGVLNRLLMSIGLISEP 164

Query: 141 IRMQNDANGIGVILLQVWKQMPFALLLLSGSVQAIGDTVLDAARNLGAGAWVRFRRIVLP 200
           I M      + +++   +  +PF +L L  ++  +   +L+AA +LG   +  F  I +P
Sbjct: 165 IPMLY--TNVSMLIGMTYVYLPFMILPLYANLVKMDFRLLEAAYDLGTSPFKAFWLITVP 222

Query: 201 LTLRALQTAMMLIFIGAAGDFSFQS-VAGPVNLNSMSQLMLRVQQSGAEGWNQAAVVAVM 259
           L+   +    ML+FI   G+F   S + GP NL  M   ++  +   A  W +A  +AV+
Sbjct: 223 LSKAGIIAGFMLVFIPCVGEFVIPSLLGGPENL--MIGRVVWDEMFTANDWPRATALAVV 280

Query: 260 LMLL 263
           ++ L
Sbjct: 281 MIAL 284