Pairwise Alignments

Query, 284 a.a., ABC transporter permease subunit from Dickeya dadantii 3937

Subject, 287 a.a., Spermidine Putrescine ABC transporter permease component PotB (TC 3.A.1.11.1) from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score = 82.8 bits (203), Expect = 8e-21
 Identities = 61/214 (28%), Positives = 106/214 (49%), Gaps = 10/214 (4%)

Query: 54  LTDEQLWRSFFYSARIALVSALLSAALAYPLAIWLRKPFPGAVTLRALLKAPLLVPGLTA 113
           L D   +    +S  +AL++ L    L YP A W     P  +  R LL   L+VP  T 
Sbjct: 56  LLDPLYFEVLLHSLNMALIATLSCLVLGYPFA-WFLAKLPEKI--RPLLLFLLIVPFWTN 112

Query: 114 AFLFVN----FISYQGFLNVAMLRLGLTERPIRMQNDANGIGVILLQVWKQMPFALLLLS 169
           + + +     F+S +G+LN  +L LG+ + PIR+    +   VI+  V+  +PF ++ L 
Sbjct: 113 SLIRIYGLKIFLSTKGYLNEFLLWLGVIDTPIRIMFTPSA--VIIGLVYILLPFMVMPLY 170

Query: 170 GSVQAIGDTVLDAARNLGAGAWVRFRRIVLPLTLRALQTAMMLIFIGAAGDFSFQSVAGP 229
            S++ +   +L+AAR+LGA     F RI++PLT+  +    +L+ + A G F    + G 
Sbjct: 171 SSIEKLDKPLLEAARDLGASKMQTFIRIIIPLTMPGIVAGCLLVMLPAMGLFYVSDLMGG 230

Query: 230 VNLNSMSQLMLRVQQSGAEGWNQAAVVAVMLMLL 263
              N +   +++VQ      W   A  ++ L ++
Sbjct: 231 AK-NLLIGNVIKVQFLNIRDWPFGAATSITLTIV 263