Pairwise Alignments

Query, 557 a.a., Tar ligand binding domain-containing protein from Dickeya dadantii 3937

Subject, 553 a.a., Methyl-accepting chemotaxis protein I (serine chemoreceptor protein) from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  363 bits (931), Expect = e-104
 Identities = 241/572 (42%), Positives = 342/572 (59%), Gaps = 38/572 (6%)

Query: 4   LKDITVRRMMLIILALFSVVWGMASSFTLYSLGNVN---SLLSDNQEQKKSYSI----LV 56
           LK I +   +L++LALF ++   +      SL N     ++L   ++Q+ + +     L+
Sbjct: 2   LKRIKIVTSLLLVLALFGLLQLTSGGLFFNSLKNDKENFTVLQTIRQQQSALNATWVELL 61

Query: 57  RGNDQYSRAVTRMSRIPELIQQGEMDNAQKTLISATDALKNTKEALTQFKHSRQVGVSDE 116
           +  +  +RA  R       I  G      + +  AT+ LK T++   Q++   +     E
Sbjct: 62  QTRNTLNRAGIRWMMDQSNIGSGA--TVAELMQGATNTLKLTEKNWEQYEALPRDPRQSE 119

Query: 117 QVQQLIASWEQVLGNAVEPMMSALKDGRIDEF--------KRVFLKQYPPMSVEFGELTE 168
                I     +   A+  ++  L  G+I+EF        +  F KQY     +   L  
Sbjct: 120 AAFLEIKRTYDIYHGALAELIQLLGAGKINEFFDQPTQSYQDAFEKQYMAYMQQNDRL-- 177

Query: 169 KYAAAIQADSTITNVGRYIEISKNVLLAALIIGVIV---LLLSDRYLVNYLVKPIGQIKR 225
            Y  A++ +++  N   ++ +S  VL+A L++ + V   + LS       L+ P+ ++  
Sbjct: 178 -YDIAVEDNNSSYNQAMWVLVS--VLIAVLVVIIAVWFGIKLS-------LIAPMNRLIE 227

Query: 226 HLELLTSGKLGVELDEFGRNCAGQLIPYIRAMQHSLRNTVQTIHASSSVIYTGTSEIRQG 285
            +  + SG L   +D  G N  GQL   +R MQ  L  TV  +   ++ IY+G SEI  G
Sbjct: 228 SIRHIASGDLVKRIDVEGSNEMGQLAENLRHMQSELMRTVGDVRNGANAIYSGASEIAMG 287

Query: 286 NDELSRRTDQQAAALQETAASMEELTSTVKNNADNVRQARQISEEAQRMARQGGDITDSV 345
           N++LS RT+QQAA+L+ETAASME+LT+TVK NA+N RQA  ++  A   A++GG + D+V
Sbjct: 288 NNDLSSRTEQQAASLEETAASMEQLTATVKQNAENARQASHLALSASETAQKGGKVVDNV 347

Query: 346 VTTMQGISDSSRKIADITSVINGIAFQTNILALNAAVEAARAGEQGRGFAVVAGEVRNLA 405
           V TM+ I+ SS+KIADI SVI+GIAFQTNILALNAAVEAARAGEQGRGFAVVAGEVRNLA
Sbjct: 348 VQTMRDIASSSQKIADIISVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVAGEVRNLA 407

Query: 406 QRSAQAAKEIETLIGESVSRVSTGSELVREAGNAMEVIISSVSRVHELMGEISAASDEQS 465
           QRSAQAA+EI++LI +SVSRV  GS LV  AG  M+ I+++V+RV ++MGEI++ASDEQS
Sbjct: 408 QRSAQAAREIKSLIEDSVSRVDVGSTLVESAGETMDEIVNAVTRVTDIMGEIASASDEQS 467

Query: 466 RGIAQIGQAVTEMDGVTQQNAALVEEASAAAASLEDQAQSLAVAVAAFDLGDTPTALRSP 525
           RGI Q+G AV EMD VTQQNA+LVEE++AAAA+LE+QA  L  AVA F +       R  
Sbjct: 468 RGIDQVGLAVAEMDRVTQQNASLVEESAAAAAALEEQASRLTQAVAVFRIHQQQQRAR-- 525

Query: 526 RASAAALKRPVSASSLGARPVTASSQGDWETF 557
               AA+K P + SS   +   A    +WETF
Sbjct: 526 --EVAAVKTPAAVSS--PKAAVADGSDNWETF 553