Pairwise Alignments

Query, 557 a.a., Tar ligand binding domain-containing protein from Dickeya dadantii 3937

Subject, 546 a.a., methyl-accepting chemotaxis protein III, ribose and galactose sensor receptor from Escherichia coli BL21

 Score =  343 bits (880), Expect = 1e-98
 Identities = 214/526 (40%), Positives = 309/526 (58%), Gaps = 20/526 (3%)

Query: 1   MNFLKDITVRRMMLIILALFSVVWGMASSFTLYSLGNVNSLLSDNQEQKKSYSILVRGND 60
           + FL  I +  +   IL    V++ ++S+   Y L       +D  ++  +  I +R   
Sbjct: 9   LGFLHHIRLVPLFACILGGILVLFALSSALAGYFLWQ-----ADRDQRDVTAEIEIRTGL 63

Query: 61  QYSRAVTRMSRIPELIQQG------EMDNAQKTLISATDALKNTKEALTQFKHSRQVGVS 114
             S    R +RI  +IQ G      EM+  ++ +  A   +K +++    +++      +
Sbjct: 64  ANSSDFLRSARI-NMIQAGAASRIAEMEAMKRNIAQAESEIKQSQQGYRAYQNRPVKTPA 122

Query: 115 DEQVQQLIASWEQVLGNAVEPMMSALKDGRIDEFKRVFLKQYPPMSVEFGELTEKYAAAI 174
           DE +   +    Q     ++PM+   K+G  +       +Q  P+   + ++  K   A+
Sbjct: 123 DEALDTELNQRFQAYITGMQPMLKYAKNGMFEAIINHESEQIRPLDNAYTDILNK---AV 179

Query: 175 QADSTITN-----VGRYIEISKNVLLAALIIGVIVLLLSDRYLVNYLVKPIGQIKRHLEL 229
           +  ST  N       +   +    ++ A ++ +++ L++   L   +++P+    + +E 
Sbjct: 180 KIRSTRANQLAELAHQRTRLGGMFMIGAFVLALVMTLITFMVLRRIVIRPLQHAAQRIEK 239

Query: 230 LTSGKLGVELDEFGRNCAGQLIPYIRAMQHSLRNTVQTIHASSSVIYTGTSEIRQGNDEL 289
           + SG L +  +  GRN  G+L  +++ MQHSL  TV T+   +  IY GTSEI  GN +L
Sbjct: 240 IASGDLTMNDEPAGRNEIGRLSRHLQQMQHSLGMTVGTVRQGAEEIYRGTSEISAGNADL 299

Query: 290 SRRTDQQAAALQETAASMEELTSTVKNNADNVRQARQISEEAQRMARQGGDITDSVVTTM 349
           S RT++QAAA+++TAASME+LT+TVK NADN   A ++++EA   A  GG     VV TM
Sbjct: 300 SSRTEEQAAAIEQTAASMEQLTATVKQNADNAHHASKLAQEASIKASDGGQTVSGVVKTM 359

Query: 350 QGISDSSRKIADITSVINGIAFQTNILALNAAVEAARAGEQGRGFAVVAGEVRNLAQRSA 409
             IS SS+KI++IT+VIN IAFQTNILALNAAVEAARAGEQGRGFAVVA EVR LA RSA
Sbjct: 360 GAISTSSKKISEITAVINSIAFQTNILALNAAVEAARAGEQGRGFAVVASEVRTLASRSA 419

Query: 410 QAAKEIETLIGESVSRVSTGSELVREAGNAMEVIISSVSRVHELMGEISAASDEQSRGIA 469
           QAAKEIE LI ESV  +  GS+ V  AG  M  I+ +V+ V  +M EI+AASDEQSRGI 
Sbjct: 420 QAAKEIEGLISESVRLIDLGSDEVATAGKTMSTIVDAVASVTHIMQEIAAASDEQSRGIT 479

Query: 470 QIGQAVTEMDGVTQQNAALVEEASAAAASLEDQAQSLAVAVAAFDL 515
           Q+ QA++EMD VTQQNA+LVEEASAAA SLE+QA  L  AV  F L
Sbjct: 480 QVSQAISEMDKVTQQNASLVEEASAAAVSLEEQAARLTEAVDVFRL 525