Pairwise Alignments

Query, 365 a.a., ABC transporter substrate-binding protein from Dickeya dadantii 3937

Subject, 320 a.a., ABC transporter, substrate binding protein (nitrate/sulfonate) from Agrobacterium fabrum C58

 Score = 79.0 bits (193), Expect = 2e-19
 Identities = 84/297 (28%), Positives = 134/297 (45%), Gaps = 26/297 (8%)

Query: 54  GSKPFIG-GPLGLAYIRHSLEQAFEPQGIK---VRWSFFKGAGPAVNEALANQQLDVAYL 109
           G  PF+    + LA  +  +++ F   G+K   ++W  F G GP VNEA A+  LD+A L
Sbjct: 32  GFMPFVPYSAILLAKQKGWVDEEFTKAGLKDVEIKWHQFAG-GPPVNEAFASGALDIAAL 90

Query: 110 GDLAAIIGRSGGLPTR-VLLGSRGS-SSYLAATPESGIARIEDLRGKRVAVYKGTADQLS 167
           GD  ++I  + G+ TR V L  +G+ +  L    +S +  ++DL+GK+VA  +G      
Sbjct: 91  GDTPSLIAFANGIDTRFVGLACKGAKAEALIVLKDSSVKTVKDLKGKKVATLRGGNVHEL 150

Query: 168 FERALKSAGLNERDIRVINLDWTAGKAALAARRVDAVWGGVSLLA-LRPQGIRIITSSRD 226
               L  AGL   D+  +NL       AL    VDAV     LL  L  +G+    + RD
Sbjct: 151 LVLVLAEAGLKISDVEFLNLGLQDMGIALTKGDVDAVLVWEPLLTKLDSEGVS--RTLRD 208

Query: 227 LGWANTTQAVVLATQDFIQRYPQVTQQLAAVLVQEAHWV-SDPAH----LADYIQLMADQ 281
                +    ++A   F  ++P V +     + + A  + SDPA     LA  + L   Q
Sbjct: 209 GAGLKSNLNPIVALGSFAAKHPDVLKAYLQAVKRGAEALRSDPAGSAQVLAPVVGLTPKQ 268

Query: 282 SQIPAALFEEQFRPDSLNLQSSPRLDPFLRSNLQDSVQRAHAAGLIRSAFSVEEWLD 338
           +++  + FE +           P +    ++ L DSV+       IR  F V  + D
Sbjct: 269 TELAFSRFEWK-----------PTVTEADQAELADSVKFLLDNHFIRQTFEVSSFAD 314