Pairwise Alignments

Query, 363 a.a., ATP-binding cassette domain-containing protein from Dickeya dadantii 3937

Subject, 334 a.a., Oligopeptide transport ATP-binding protein OppF (TC 3.A.1.5.1) from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  274 bits (701), Expect = 2e-78
 Identities = 156/323 (48%), Positives = 204/323 (63%), Gaps = 6/323 (1%)

Query: 5   RYPLLEAEEVDVTFPVSG--RFPWQKREVL-AVNGVSLQIAPGETLGLVGESGSGKSTLG 61
           R  LLE  ++ V F +    ++ WQ  + L AV+GV+L++  GETLG+VGESG GKST  
Sbjct: 8   RKVLLEIADLKVHFDIKEGKQWFWQPPKTLKAVDGVTLRLYEGETLGVVGESGCGKSTFA 67

Query: 62  RALLQLETLKHGRVRFNGIPVSDGLHSDVARLRQETAMIFQDPFSSLNPRQTLFQSIAEV 121
           RA++ L     G+V + G  +      +   +R +  MIFQDP +SLNPR T+ + IAE 
Sbjct: 68  RAIIGLVKATDGKVAWLGKDLLGMKADEWREVRSDIQMIFQDPLASLNPRMTIGEIIAEP 127

Query: 122 LKV-HKRLSPAATAERVNQLLAMVGLRPEHGRRYPHDLSGGQCQRAGIARALALEPQLVV 180
           L+  H +LS     +RV  ++  VGL P    RYPH+ SGGQCQR GIARAL LEP+L++
Sbjct: 128 LRTYHPKLSRQDVRDRVKAMMLKVGLLPNLINRYPHEFSGGQCQRIGIARALILEPKLII 187

Query: 181 ADECVSALDVSIQGQIINLLMSLRAQMGLAMIFIAHDLAVVRRLCDRVAVMYLGRIVEEG 240
            DE VSALDVSIQ Q++NLL  L+ +MGL++IFIAHDLAVV+ + DRV VMYLG  VE G
Sbjct: 188 CDEPVSALDVSIQAQVVNLLQQLQREMGLSLIFIAHDLAVVKHISDRVLVMYLGHAVELG 247

Query: 241 PTEAVFNQPQHPYTAALISAIPDIDPD--RPLPANGLMGEPPSPLALPPGCAFHPRCAHA 298
             + V++ P HPYT AL+SA+P  DPD  R      L GE PSP+  P GC F  RC  A
Sbjct: 248 TYDEVYHNPLHPYTKALMSAVPIPDPDLERNKKIQLLEGELPSPINPPSGCVFRTRCPIA 307

Query: 299 VAACRQQSPSLQQQEHQRVACLR 321
              C Q  P L+      V+CL+
Sbjct: 308 GPECAQTRPVLEGSFRHAVSCLK 330