Pairwise Alignments

Query, 379 a.a., cytochrome d ubiquinol oxidase subunit II from Dickeya dadantii 3937

Subject, 335 a.a., ubiquinol oxidase subunit II from Pseudomonas simiae WCS417

 Score =  168 bits (425), Expect = 2e-46
 Identities = 109/367 (29%), Positives = 176/367 (47%), Gaps = 44/367 (11%)

Query: 7   LRFVWWLLIGVLLIGFAVTDGFDMGVGVLVRLM-GRNDVERRVMINSIAPHWDGNQVWLI 65
           L  +W ++I   ++ + V DGFD+G+G+L   + G+ D  R VM+N++AP WDGN+ WL+
Sbjct: 5   LPLIWAVIIIFGIMMYVVMDGFDLGIGILFPFIPGKTD--RDVMMNTVAPVWDGNETWLV 62

Query: 66  TAGGALFAAWPMVYAAAFSGFYIAMILVLASLYFRPVGFDYRSKIEDPRWRNMWDWGIFI 125
             G ALF A+P+ Y+   S  Y+ +IL+L  L FR V F++R K +D + R++WD     
Sbjct: 63  LGGAALFGAFPLAYSVVLSALYLPLILMLIGLIFRGVAFEFRFKAKDHK-RHLWDKAFIG 121

Query: 126 GSFVPPVVIGVAFGNLLQGVPFHVDEYLRLYYTGNFFQLLNPFGLLAGVVSLSMIVAQGS 185
           GS       GVA G  + G+P  VD      + G       PF +  GV  +      G 
Sbjct: 122 GSLAATFFQGVALGAFIDGIPV-VDR----QFAGGSLDWATPFTMFCGVALIVAYALLGC 176

Query: 186 TYLVMRTSGDLHFRAKKVAQFSSLALTVTFALAGVWVVYGIDGYAVTSVMNTAAESNPL- 244
           T+L+M+T G L  +   +A+  +  +     +  +W                     PL 
Sbjct: 177 TWLIMKTEGPLQEKMHNLARPLAFVVLAVIGIVSIW--------------------TPLT 216

Query: 245 HKEVARQAGAWLVNFNNHPVLWAVPLLGVVLPLMTAVMARAEKGA--MAFLFSSLSIACV 302
           H E+A +   W   F    + W +P+  +VL  M  +     + A    FL + + I   
Sbjct: 217 HPEIASR---W---FTLPNLFWFLPVPILVLVTMYGLFRAVARHAHYTPFLLTLVLIFLG 270

Query: 303 ILTAGIAMFPFIMPSVTVPNVSLTVWDATSSLLTLRVMTVVAIIFVPIVLSYTIWCYYKM 362
               GI+++P I+P       S+++WDA +   +   M V  +  +P +L YT W YY  
Sbjct: 271 YSGLGISLWPNIIPP------SVSIWDAAAPPQSQGFMLVGTLFIIPFILGYTFWSYYVF 324

Query: 363 FGRITKE 369
            G++T E
Sbjct: 325 RGKVTHE 331