Pairwise Alignments

Query, 303 a.a., recombination-associated protein RdgC from Dickeya dadantii 3937

Subject, 303 a.a., nucleoid-associated ssDNA and dsDNA binding protein; competitive inhibitor of RecA function from Escherichia coli BL21

 Score =  487 bits (1253), Expect = e-142
 Identities = 245/303 (80%), Positives = 268/303 (88%)

Query: 1   MLWFKNLMIYRLSRDISLSADAMETQLASLAFTPCGSQDPSKTGWVSPMGPHGDALTHVV 60
           MLWFKNLM+YRLSR+ISL A+ ME QLAS+AFTPCGSQD +K GWV PMG H DALTHV 
Sbjct: 1   MLWFKNLMVYRLSREISLRAEEMEKQLASMAFTPCGSQDMAKMGWVPPMGSHSDALTHVA 60

Query: 61  NGQILICARKEEKILPAPVIKQALQARIDKLEGEQHRKLKKTEKDSLKDEVLHSLLPRAF 120
           NGQI+ICARKEEKILP+PVIKQAL+A+I KLE EQ RKLKKTEKDSLKDEVLHSLLPRAF
Sbjct: 61  NGQIVICARKEEKILPSPVIKQALEAKIAKLEAEQARKLKKTEKDSLKDEVLHSLLPRAF 120

Query: 121 SRFSQISLWIDTVNHLIMVDAASAKKAEDTLALLRKTLGSLPVVPLTMENPIELTLTEWV 180
           SRFSQ  +WIDTVN LIMVD ASAKKAEDTLALLRK+LGSLPVVPL+MENPIELTLTEWV
Sbjct: 121 SRFSQTMMWIDTVNGLIMVDCASAKKAEDTLALLRKSLGSLPVVPLSMENPIELTLTEWV 180

Query: 181 RSGQTPAGFALQDEAELKAVLEDGGVIRCKKQELVSDEIATHIEAGKVVTKLALDWQERI 240
           RSG    GF L DEAELK++LEDGGVIR KKQ+L S+EI  HIEAGKVVTKLALDWQ+RI
Sbjct: 181 RSGSAAQGFQLLDEAELKSLLEDGGVIRAKKQDLTSEEITNHIEAGKVVTKLALDWQQRI 240

Query: 241 QLVLADDGSLKRLKFADTLREQNDDIDREDVAQRFDADFTLMTGEVAALIASLTDALGGE 300
           Q V+ DDGSLKRLKF D LR+QN+DIDRED AQRFDADF LMTGE+AALI +L + LGGE
Sbjct: 241 QFVMCDDGSLKRLKFCDELRDQNEDIDREDFAQRFDADFILMTGELAALIQNLIEGLGGE 300

Query: 301 AQR 303
           AQR
Sbjct: 301 AQR 303