Pairwise Alignments

Query, 631 a.a., polysaccharide biosynthesis protein from Dickeya dadantii 3937

Subject, 664 a.a., membrane protein from Pseudomonas simiae WCS417

 Score =  519 bits (1336), Expect = e-151
 Identities = 295/642 (45%), Positives = 412/642 (64%), Gaps = 31/642 (4%)

Query: 8   LLSAERRNKRIMTVIYDAIAIVVSLYLAVAVRLGTLDFPVGYA-EIASVLVTLSITLLVF 66
           L+   RR KR + V  D + +  +L+LA  VRLG  D    +   +   L    I + +F
Sbjct: 8   LVGLPRRQKRFLQVATDIVLVWAALWLAFVVRLGFDDLNNPFVVHLWLFLSAPVIAIPLF 67

Query: 67  VRCGMYRAVLRYMMLPAMGYVFLSVILSAISLALSSFFF---QSFVPRSVPFIYAGLATL 123
           +  GMYRAV+RY    A+  +  +V LSA+ LAL  + +   Q+ VPRS+ F Y  L+ +
Sbjct: 68  IHFGMYRAVMRYFGNDALIAIIKAVSLSALLLALVVYLYSNHQTVVPRSIVFNYWWLSMV 127

Query: 124 ALGSPRVLIRTFY---YHYYKRQKP---------NVFIYGAGATGRDLLYSLIQGDEFHP 171
            +G  R+ +R ++   +    +  P          V IYGAGA G  L+ +L  G    P
Sbjct: 128 IIGGLRLAMRQYFQGDWFTAAQHVPFTSRDDGLIKVAIYGAGAAGNQLVAALRMGRVMRP 187

Query: 172 VVVLDDDEKKIGQIICGIKVHHSREFEKLKPLYQPVKLLLAINNIKKGQRLRLLEKLSHW 231
           V  +DDD     +II G++V+  +  +++       +LLLAI +  + +R  +L  L  +
Sbjct: 188 VAFIDDDSGISDRIISGLQVYKPKRIQQMIDETGAEELLLAIPSSTRARRREILGYLEGY 247

Query: 232 PIEVQSVPSVEDIAAGKATATEIRDLDVADLLGREAVGPDKQLMSKNITGKSVMVTGAGG 291
           P+ V+SVP   D+A+G+    +I+++D+ADLLGR+ V    +L+ + I  + VMV+GAGG
Sbjct: 248 PLHVRSVPGFMDLASGRVKVDDIQEVDIADLLGRDPVPAQPELLERCIKHRVVMVSGAGG 307

Query: 292 SIGSELCRQILTQHPRTLVLFELNEYNLYTIDQELQGIKKRLLLDTKIVAALGSVQKQNR 351
           SIGSELCRQILT  P +L+LF+ +EYNLY I  EL+   +   L+  ++  LGSV+ Q++
Sbjct: 308 SIGSELCRQILTLEPTSLLLFDHSEYNLYCILSELEQRVQSESLNVTLLPILGSVRHQDK 367

Query: 352 IQKLIRAYQVETIYHAAAYKHVPLVEDNVIEGIRNNVFGTLACAEAAIEEGVRNFTLIST 411
           + +++  + V+T+YHAAAYKHVP+VE N+ EGI NNV GTL  A+AA++ GV NF LIST
Sbjct: 368 LLEVMNTWSVDTVYHAAAYKHVPMVEHNIAEGILNNVIGTLNTAQAALQAGVENFVLIST 427

Query: 412 DKAVRPTNIMGTSKRMAELILQALAE--------------RQNQTTFTMVRFGNVLGSSG 457
           DKAVRPTN+MG++KR+AEL+LQAL++              R N+T FTMVRFGNVLGSSG
Sbjct: 428 DKAVRPTNVMGSTKRLAELVLQALSKEVAPTLFGDASNISRVNKTRFTMVRFGNVLGSSG 487

Query: 458 SVVPLFKKQIRQGGPVTVTHPDITRYFMLIPEAAQLVIQAGAMGINGQVFVLDMGEPVKI 517
           SV+PLF KQI+ GGP+TVTHP ITRYFM IPEAAQLVIQAG+MG  G VFVLDMGEPVKI
Sbjct: 488 SVIPLFHKQIQAGGPLTVTHPKITRYFMTIPEAAQLVIQAGSMGQGGDVFVLDMGEPVKI 547

Query: 518 LDLARRMINLMGMKGYIEGYGEEGDIVIKFTGLRPGEKLYEELLIGENVEGTSHPRIMTA 577
           ++LA +MI+L G+          GDI+I F+GLRPGEKLYEELLIG+NV  T HP IM A
Sbjct: 548 VELAEKMIHLSGL-SIRSDTNPHGDILINFSGLRPGEKLYEELLIGDNVAATRHPMIMRA 606

Query: 578 QEERLSWQEMERLLQKLDKSCHDYDVGDIKKILLDAPTGYTP 619
            EE L W+ ++  L  L  +    D   ++++L +  +GY+P
Sbjct: 607 NEELLGWEVLKARLHGLLTAVEAGDFALVRQLLKNTVSGYSP 648