Pairwise Alignments

Query, 576 a.a., single-stranded-DNA-specific exonuclease RecJ from Dickeya dadantii 3937

Subject, 601 a.a., single-stranded-DNA-specific exonuclease RecJ from Rhizobium sp. OAE497

 Score =  275 bits (702), Expect = 5e-78
 Identities = 198/568 (34%), Positives = 292/568 (51%), Gaps = 27/568 (4%)

Query: 21  LPALLRRLYAQRGV---RQMQELERSLRGLL-DYRLLGGITQAVEVLRQALADNRRIVIV 76
           LP L+ R+ A RGV     ++ L+ ++R L+ D   L    +A   L +A+     + I 
Sbjct: 46  LPDLIARVLAGRGVSVDEAVEFLDPTIRSLMPDPYTLTDCEKAARRLAEAIRRGENVAIF 105

Query: 77  GDFDADGATSTALTVLALRSMGGREVQYLVPNRFEDGYGLSPEVVAQAAAKGAELIVTVD 136
           GD+D DGA S+AL    L   G +   Y +P+R  +GYG +   + Q    GA+LIVTVD
Sbjct: 106 GDYDVDGAASSALMYRFLAHFGVKAEIY-IPDRIFEGYGPNAGAINQLIDNGAQLIVTVD 164

Query: 137 NGISSHAGVDDAHRRGIAVVVTDHHLPGETLPAAEAMINPNLSDCAFPSKALAGVGVAFY 196
            G +SH  +D A  R I VVV DHH     LP   A++NPN  D       L   GV F 
Sbjct: 165 CGSTSHEALDAAKARNIDVVVIDHHQVTHALPHCYALVNPNREDDLSGQGHLCAAGVVFL 224

Query: 197 LMMALRANLRECGWFAERGLAEPNLAELLDLVALGTVADVVPLDANNRILISQGLSRIRA 256
           +++A    LRE G   ++ +   +L + LD+VAL TV DVVPL   NR  + +GL   R 
Sbjct: 225 VLVATLRLLREAG---DKRILAIDLLQWLDIVALATVCDVVPLKGLNRAYVVKGLVAAR- 280

Query: 257 GKCRPGIRALLEVSNRDAAQLVASDLGFALGPRLNAAGRLDDMSVGVELLLCNDIVQARM 316
            +   G+ AL   +   +  +     GF +GPR+NA GR+ D ++G  LL  +D  +A  
Sbjct: 281 HQGNAGLAALFRKAGL-SGPVTPYHFGFLVGPRINAGGRIGDAALGSRLLTLDDAGEAET 339

Query: 317 LASDLDALNQSRREIEAGM--QVEALHLCEQLERSRDTLPLGLAMYHPQWHQGVVGILAS 374
           +A  LD LN+ R+ +EA M  + EA    E  +    ++   +     +WH G+VG+LA+
Sbjct: 340 IAQKLDELNRDRQAMEAAMLQEAEAEAFAEYGDGQGASV---IVTARDKWHPGIVGLLAA 396

Query: 375 RIKERFHRP--VIAFAPAGDGILKGSGRSIAGLHLRDALERLDTCHPGLMLKFGGHAMAA 432
           R+KE+F RP   IAF P+G G   GSGRSI G  +   +        GL++K GGHAMAA
Sbjct: 397 RLKEKFKRPAFAIAFDPSGRG--TGSGRSINGFDMGRMVRA--AVDEGLLVKGGGHAMAA 452

Query: 433 GLSLVEDRFDEFRQRFADLVGEWLDASQLEGVVWSDGELASPELTLGTAEMLREAGPWGQ 492
           GL++  ++    R  F +   + +        +  DG + +   TL   + L  AGP+G 
Sbjct: 453 GLTVEREKLGALRSFFTERAEKTVANLVANETLKIDGAIGASGATLDLIDRLETAGPYGS 512

Query: 493 AFPEPTFD-GRFRLLQQRLVGERHLKVMVEPLGGGPLLDGIAFN-VDTLLWP---DSSVR 547
              +P F     RL   R VGE+H+KV +E + G   LDGIAF   DT L     +S   
Sbjct: 513 GHSQPVFAIPAHRLRDVRTVGEKHVKVTLEAMDGA-RLDGIAFRAADTALGNLLLNSRGA 571

Query: 548 EVELAYKLDVNEFRGKRSVQLLIEHLWP 575
            + +A  +  + ++G R +QL +    P
Sbjct: 572 NLHVAGSIGADHYQGSRRIQLRVSDAAP 599