Pairwise Alignments

Query, 576 a.a., single-stranded-DNA-specific exonuclease RecJ from Dickeya dadantii 3937

Subject, 587 a.a., single-stranded-DNA-specific exonuclease RecJ from Pectobacterium carotovorum WPP14

 Score =  925 bits (2390), Expect = 0.0
 Identities = 469/585 (80%), Positives = 522/585 (89%), Gaps = 10/585 (1%)

Query: 1   MNVVTQLRRRPTAET-ELPDSLPALLRRLYAQRGVRQMQELERSLRGLLDYRLLGGITQA 59
           M+++TQLRRRP AE  +LPD++P LLRRLYAQRGV+  QELERSL GLL+YRLL GI +A
Sbjct: 1   MDMITQLRRRPLAEDIDLPDTVPPLLRRLYAQRGVKGAQELERSLSGLLNYRLLSGIDKA 60

Query: 60  VEVLRQALADNRRIVIVGDFDADGATSTALTVLALRSMGGREVQYLVPNRFEDGYGLSPE 119
           +++L+  LA+ R IVIVGDFDADGATSTALTVLALRSMGG  V+YLVPNRFE+GYGLSPE
Sbjct: 61  IDLLQHTLAEKRCIVIVGDFDADGATSTALTVLALRSMGGVNVKYLVPNRFENGYGLSPE 120

Query: 120 VVAQAAAKGAELIVTVDNGISSHAGVDDAHRRGIAVVVTDHHLPGETLPAAEAMINPNLS 179
           VVAQAAA GAE+IVTVDNGISSHAGV+DAHRRGIAV+VTDHHLPGE LPAA+AMINPNL 
Sbjct: 121 VVAQAAALGAEVIVTVDNGISSHAGVEDAHRRGIAVLVTDHHLPGEILPAADAMINPNLP 180

Query: 180 DCAFPSKALAGVGVAFYLMMALRANLRECGWFAE-----RGLAEPNLAELLDLVALGTVA 234
           DC FPSKALAGVGVAFYLMMAL   LR+  WF +     +GLA+PNL ELLDLVALGTVA
Sbjct: 181 DCQFPSKALAGVGVAFYLMMALFVRLRDSDWFTQPFFTQQGLAKPNLTELLDLVALGTVA 240

Query: 235 DVVPLDANNRILISQGLSRIRAGKCRPGIRALLEVSNRDAAQLVASDLGFALGPRLNAAG 294
           DVVPLDANNRIL++QGL+RIRAG+CRPGIRALLEV+NRDA+QLV+SDLGFA+GPRLNAAG
Sbjct: 241 DVVPLDANNRILVAQGLNRIRAGECRPGIRALLEVANRDASQLVSSDLGFAIGPRLNAAG 300

Query: 295 RLDDMSVGVELLLCNDIVQARMLASDLDALNQSRREIEAGMQVEALHLCEQLERSRDTLP 354
           RLDDM+VGVELLL NDI QARMLA+DLDALNQ RREIE GMQVEAL LCE LER+R  LP
Sbjct: 301 RLDDMTVGVELLLSNDITQARMLANDLDALNQDRREIEQGMQVEALRLCESLERTRTELP 360

Query: 355 LGLAMYHPQWHQGVVGILASRIKERFHRPVIAFAPAGDGILKGSGRSIAGLHLRDALERL 414
            GLAMYHP+WHQGVVGILASRIKERFHRPVIAFAPAGDG+LKGSGRSI+GLHLRDALERL
Sbjct: 361 YGLAMYHPEWHQGVVGILASRIKERFHRPVIAFAPAGDGMLKGSGRSISGLHLRDALERL 420

Query: 415 DTCHPGLMLKFGGHAMAAGLSLVEDRFDEFRQRFADLVGEWLDASQLEGVVWSDGELASP 474
           DT +PG+M KFGGHAMAAGLSL EDRFD+FRQRF +LVGEWLD SQLEGVVWSDGELA P
Sbjct: 421 DTLYPGMMDKFGGHAMAAGLSLHEDRFDDFRQRFGELVGEWLDPSQLEGVVWSDGELALP 480

Query: 475 EL-TLGTAEMLREAGPWGQAFPEPTFDGRFRLLQQRLVGERHLKVMVEPLGGG---PLLD 530
           EL  L TAEMLR AGPWGQAFPEPTFDG FR+LQ RL+ ERHLK M EP+G     PLLD
Sbjct: 481 ELDLLSTAEMLRYAGPWGQAFPEPTFDGCFRILQPRLLKERHLKAMFEPIGATGAVPLLD 540

Query: 531 GIAFNVDTLLWPDSSVREVELAYKLDVNEFRGKRSVQLLIEHLWP 575
           GIAFNVDT +WPD S++EVE+ Y+LD+NEFRGKRSVQL+I+HLWP
Sbjct: 541 GIAFNVDTTIWPDPSIKEVEMVYRLDINEFRGKRSVQLMIQHLWP 585