Pairwise Alignments

Query, 576 a.a., single-stranded-DNA-specific exonuclease RecJ from Dickeya dadantii 3937

Subject, 577 a.a., single-stranded-DNA-specific exonuclease RecJ from Escherichia coli ECRC99

 Score =  879 bits (2271), Expect = 0.0
 Identities = 437/572 (76%), Positives = 503/572 (87%), Gaps = 1/572 (0%)

Query: 6   QLRRRPTAET-ELPDSLPALLRRLYAQRGVRQMQELERSLRGLLDYRLLGGITQAVEVLR 64
           QLRRR   ET +LP  LP LLRRLYA RGVR  QELERS++G+L ++ L G+ +AVE+L 
Sbjct: 6   QLRRREVDETADLPAELPPLLRRLYASRGVRSAQELERSVKGMLPWQQLSGVEKAVEILY 65

Query: 65  QALADNRRIVIVGDFDADGATSTALTVLALRSMGGREVQYLVPNRFEDGYGLSPEVVAQA 124
            A  +  RI++VGDFDADGATSTAL+VLA+RS+G   + YLVPNRFEDGYGLSPEVV QA
Sbjct: 66  NAFREGTRIIVVGDFDADGATSTALSVLAMRSLGCSNIDYLVPNRFEDGYGLSPEVVDQA 125

Query: 125 AAKGAELIVTVDNGISSHAGVDDAHRRGIAVVVTDHHLPGETLPAAEAMINPNLSDCAFP 184
            A+GA+LIVTVDNGISSHAGV+ A   GI V+VTDHHLPG+TLPAAEA+INPNL DC FP
Sbjct: 126 HARGAQLIVTVDNGISSHAGVEHARSLGIPVIVTDHHLPGDTLPAAEAIINPNLRDCNFP 185

Query: 185 SKALAGVGVAFYLMMALRANLRECGWFAERGLAEPNLAELLDLVALGTVADVVPLDANNR 244
           SK+LAGVGVAFYLM+ALR  LR+ GWF ERG+A PNLAELLDLVALGTVADVVPLDANNR
Sbjct: 186 SKSLAGVGVAFYLMLALRTFLRDQGWFDERGIAIPNLAELLDLVALGTVADVVPLDANNR 245

Query: 245 ILISQGLSRIRAGKCRPGIRALLEVSNRDAAQLVASDLGFALGPRLNAAGRLDDMSVGVE 304
           IL  QG+SRIRAGKCRPGI+ALLEV+NRDA +L ASDLGFALGPRLNAAGRLDDMSVGV 
Sbjct: 246 ILTWQGMSRIRAGKCRPGIKALLEVANRDAQKLAASDLGFALGPRLNAAGRLDDMSVGVA 305

Query: 305 LLLCNDIVQARMLASDLDALNQSRREIEAGMQVEALHLCEQLERSRDTLPLGLAMYHPQW 364
           LLLC++I +AR+LA++LDALNQ+R+EIE GMQ+EAL LCE+LERSRDTLP GLAMYHP+W
Sbjct: 306 LLLCDNIGEARVLANELDALNQTRKEIEQGMQIEALTLCEKLERSRDTLPGGLAMYHPEW 365

Query: 365 HQGVVGILASRIKERFHRPVIAFAPAGDGILKGSGRSIAGLHLRDALERLDTCHPGLMLK 424
           HQGVVGILASRIKERFHRPVIAFAPAGDG LKGSGRSI GLH+RDALERLDT +PG+MLK
Sbjct: 366 HQGVVGILASRIKERFHRPVIAFAPAGDGTLKGSGRSIQGLHMRDALERLDTLYPGMMLK 425

Query: 425 FGGHAMAAGLSLVEDRFDEFRQRFADLVGEWLDASQLEGVVWSDGELASPELTLGTAEML 484
           FGGHAMAAGLSL ED+F+ F+QRF +LV EWLD S L+G V SDG L+  E+T+  A++L
Sbjct: 426 FGGHAMAAGLSLEEDKFELFQQRFGELVTEWLDPSLLQGEVVSDGPLSPAEMTMEVAQLL 485

Query: 485 REAGPWGQAFPEPTFDGRFRLLQQRLVGERHLKVMVEPLGGGPLLDGIAFNVDTLLWPDS 544
           R+AGPWGQ FPEP FDG FRLLQQRLVGERHLKVMVEP+GGGPLLDGIAFNVDT LWPD+
Sbjct: 486 RDAGPWGQMFPEPLFDGHFRLLQQRLVGERHLKVMVEPVGGGPLLDGIAFNVDTALWPDN 545

Query: 545 SVREVELAYKLDVNEFRGKRSVQLLIEHLWPL 576
            VREV+LAYKLD+NEFRG RS+Q++I+++WP+
Sbjct: 546 GVREVQLAYKLDINEFRGNRSLQIIIDNIWPI 577