Pairwise Alignments

Query, 506 a.a., SusD family. from Echinicola vietnamensis KMM 6221, DSM 17526

Subject, 564 a.a., RagB/SusD family nutrient uptake outer membrane protein from Pontibacter actiniarum KMM 6156, DSM 19842

 Score =  134 bits (338), Expect = 7e-36
 Identities = 134/493 (27%), Positives = 217/493 (44%), Gaps = 49/493 (9%)

Query: 3   LKPYILIVLLMAWAQSCNEEKLNPVNPNELSTETFYKTGPQYVAAVNAAYAALQANDLYN 62
           +K  I ++ L+     C +  +NP++  E S+E +Y    +   A+N  Y       L++
Sbjct: 1   MKKLIALIALLPLLLGCTKLDVNPLS--EGSSENWYSDETEITLALNDLYRTY----LWD 54

Query: 63  REYFFIQDLLSDDVASGGAQLEAHRARVLNHVFDGSNSLVLANWRGWYRVIQRANLVIAN 122
            E  +  + +SD+     A ++A  A  +N  +  S  L    W   Y+ I RAN ++ +
Sbjct: 55  FEINYNTERMSDNWTQRQA-IDAFPAGSVNSEWSRSEDL----WLSTYKGITRANTILNS 109

Query: 123 VDQPQEDISENLRDRVLGEAYFLRGLAYYELSTLWGGVPLMTVSATGPDGAP--RASQED 180
           +D     ++E    ++  EA  +R + Y  L   +G VP  T      D     R  +E 
Sbjct: 110 LDNATGKVAEAKIKQLAAEASLMRAVFYARLVFYYGDVPFYTGYLNIDDAFELGRTDKEV 169

Query: 181 SYQQVIDDLTAAIGLLPPKSTYSGADVGRASIGAAQAVLAKLHLFRGDFAAAKPLLQAII 240
             QQV  D  AAI  LP   +Y   ++GRA+ GAA A  A+  L+ GD+  A+   +A +
Sbjct: 170 VLQQVYKDFDAAIESLPV--SYGSNELGRATKGAALAFKARAALYMGDWVIARDAAKACM 227

Query: 241 DSGEYRLVDRYLDNFEEENENNAESLWEVQFSEDFGTDGGWNADGNGIAEVTFRGQEYGP 300
           D   Y L   Y + F  +  N+ E+++ +  S + G+  G           T  G     
Sbjct: 228 DLQVYSLHPNYGEYFLSKTRNSPETVFALPRSFELGSSWG----AKNFYTRTPGGSAVAQ 283

Query: 301 TAWRNIIPNPTLVAEFEQES------NGAEKDDPRYGYTLYS-----LGDTFNNGESVLS 349
            +W      P        ES         +  DPR   T+       LG  +N       
Sbjct: 284 PSWELFCAYPCTDGLPIDESPLFNPREPFKNRDPRCAMTIVEFGTEHLGVIYNPNPYATK 343

Query: 350 EDNVQ--------GNTSVPSWRKYQMIYKRE------AENTQSGINFRVIRYADVLLMMA 395
             N++           SV ++  Y  +  ++      ++N ++  + R++RYADVLLM A
Sbjct: 344 VLNMETEKMVANKDTRSVDTYASYNGLALKKGVDEDWSDNNETDFDIRIMRYADVLLMYA 403

Query: 396 EVENETSG-PASALPYINQVRARADVAMPPYPTAQYPTGT---QEEMRRAIQHERRVELA 451
           E + E +   AS L  IN VRARA   +    T  YP  T   QE++R+ +++ERR+E A
Sbjct: 404 EAQIELNEIDASVLDAINAVRARA-YGVDVTNTTAYPALTATSQEQLRKELRNERRIEFA 462

Query: 452 GEQIRNRDIRRWR 464
            E  R  D+ RWR
Sbjct: 463 WENRRFDDLLRWR 475