Pairwise Alignments

Query, 506 a.a., SusD family. from Echinicola vietnamensis KMM 6221, DSM 17526

Subject, 529 a.a., RagB/SusD family nutrient uptake outer membrane protein from Phocaeicola dorei CL03T12C01

 Score =  180 bits (457), Expect = 1e-49
 Identities = 167/538 (31%), Positives = 259/538 (48%), Gaps = 52/538 (9%)

Query: 6   YILIVLLMAWAQSCNEEKLNPVNPNELSTETFYKTGPQYVAAVNAAYAALQANDLYNREY 65
           ++   +L   A  C+   L+  NPNE++  TF+K+     A VNA Y+ L     + R  
Sbjct: 7   FLFAGVLALCATGCSSSLLDIENPNEVTNTTFWKSADDAKAGVNACYSFLYKEGTWMRWL 66

Query: 66  FFIQDLLSDDVASGGAQLEA---HRARVLNHVFDGSNSLVLANWRGWYRVIQRANLVIAN 122
            F  DL SD+  S    +E     R    N+ F   N +   +W  +Y  I R N V+AN
Sbjct: 67  SFRYDLSSDEGWSSSPWIELGDWTRFLYNNYDFYEGNKV---HWEHFYVGIFRCNQVLAN 123

Query: 123 VDQPQEDISENLRDRVLGEAYFLRGLAYYELSTLWGGVPLMTVSATGPDGAPR-ASQEDS 181
           V  P  ++ E  ++++L +A FLR L Y++++ LW    L+ +     D  P+ AS+++ 
Sbjct: 124 V--PAIEMDEVQKNQLLAQASFLRALWYFQINLLWEKGTLV-LEPQNADYIPKDASEQEI 180

Query: 182 YQQVIDDLTAAIGLLPPKSTYSGADVGRASIGAAQAVLAKLHLFRGDFAAAKPLLQAIID 241
           + Q+  DLT A+  LP    +  AD+GRA+ GAA+A+L K ++ +  +  AK  LQ +ID
Sbjct: 181 WDQIEKDLTFAMENLP--EAWDAADLGRATKGAAKALLGKAYMQQHKYDRAKEQLQWLID 238

Query: 242 --SGEYRLVDRYLDNFEEENENNAESLWEVQFSEDFGTDGGWNADGNGIAEVTFRGQEYG 299
                Y L+D   DNF + NENN E ++E+QF +     GG   D + +A    R Q Y 
Sbjct: 239 REGSLYGLLDNREDNFTDLNENNQEGIFEIQFDDQ--NKGGTGNDAS-MAFGFQRTQFYA 295

Query: 300 P-----TAWRNIIPNPTLVAEFEQESNGAEKDDPR-YGYTLYS-LGDTFNNGESVLSEDN 352
           P     T W +      LV EF +E     ++D R Y   LY   GD F + +S     N
Sbjct: 296 PGGTHGTGWGDGKARRWLVDEFLKERRVDGRNDLRLYNSILYKHFGDDFPD-QSKKYYAN 354

Query: 353 VQGNTSVPSW---------RKYQMIYKREAENTQSGINFRVIRYADVLLMMAEVENETSG 403
              +     W         RKY   Y RE E+  +  N+R++RYADVLL  AE   ET  
Sbjct: 355 EDASQWFDEWGQDTEDCYIRKYNTSYYREREDYFARNNYRIMRYADVLLSYAECLVETGT 414

Query: 404 PAS-ALPYINQVRARADVAMPPYPTAQYPTGTQEEMRRAIQHERRVELAGEQIRNRDIRR 462
            AS A  Y+++VR RA ++       +    ++E   + +Q ER +EL  E  R  D++R
Sbjct: 415 SASDAAVYVDKVRERAGLSKLKDSRWKDCLSSKEVFIKRLQMERALELCFEGWRWADLKR 474

Query: 463 WRRMGYLENEP------------IPVYSDRYDLLPIPLSEIDNNSA--LTNEDQNPGF 506
           W   G L+++                   ++  +PIP SE++ +    +    QNP +
Sbjct: 475 W---GLLDSQAGIDELKARDKDFNNFVIGKHKRMPIPTSEVEISKIDDVPQLTQNPNY 529