Pairwise Alignments

Query, 407 a.a., endopeptidase Clp ATP-binding regulatory subunit (clpX) from Echinicola vietnamensis KMM 6221, DSM 17526

Subject, 442 a.a., ATP-dependent hsl protease ATP-binding subunit HslU from Variovorax sp. SCN45

 Score = 91.7 bits (226), Expect = 4e-23
 Identities = 84/272 (30%), Positives = 119/272 (43%), Gaps = 69/272 (25%)

Query: 109 MVGDTGTGKTYLAKTLAKILEVPFCIADATVLTEAGYVGEDVESILTRLLQSADYNLEAA 168
           M G  G GK    K   KI E    + D      A  V ED   I  + + +A+ N    
Sbjct: 201 MFGQMGQGKRKTRKL--KIGEAMRLLVDEEA---AKLVNED--EIRAQAITNAEQN---- 249

Query: 169 ERGIVYIDEIDKIARKSDNPSITRDVSGEGVQQAMLKLLEGTTVNVPPQGGRKHPDQKMI 228
             GIV+IDEIDK+A +S+      DVS +GVQ+ +L L+EGT V             K  
Sbjct: 250 --GIVFIDEIDKVATRSEAQG--SDVSRQGVQRDLLPLVEGTAVTT-----------KYG 294

Query: 229 AVNTEDILFICGGAFDGISRHIANRLNTQPLGFSKKTESDVVDRNNLLQYVTAPDLKSFG 288
            V T+ +LFI  GAF     H++                                 K   
Sbjct: 295 VVRTDHMLFIASGAF-----HLS---------------------------------KPSD 316

Query: 289 LIPELIGRLPVLTHLDPLDKETLKSILTEPKNALTKQYIKLMDMEGVKLEFEESGIDYIV 348
           LIPEL GR P+   L  L     +SILT+ + +L KQY  L+  EGV L+F   G++ + 
Sbjct: 317 LIPELQGRFPIRVELQSLSVSDFESILTQTRASLVKQYQALLATEGVTLDFTPEGVNRLA 376

Query: 349 EKAVEY-----NLGARGLRSICEAIITDAMYE 375
             A E      N+GAR L ++ E ++ +  ++
Sbjct: 377 TIAFEVNERTENIGARRLSTVMERLLDEVSFD 408



 Score = 88.6 bits (218), Expect = 3e-22
 Identities = 43/103 (41%), Positives = 70/103 (67%), Gaps = 1/103 (0%)

Query: 59  PKELTEYLNNYVIGQDEAKKVLSVAVYNHYKRLLQKDNKDDVKIEKSNIIMVGDTGTGKT 118
           P+E+   L+N+++GQ  AK+ +++A+ N ++R  Q D+K   +I   NI+M+G TG GKT
Sbjct: 5   PQEIVSELDNHIVGQPAAKRAVAIALRNRWRRQ-QVDDKLRHEITPKNILMIGPTGVGKT 63

Query: 119 YLAKTLAKILEVPFCIADATVLTEAGYVGEDVESILTRLLQSA 161
            +A+ LA++ + PF   +AT  TE GYVG+DV+SI+  L + A
Sbjct: 64  EIARRLARLADAPFIKVEATKFTEVGYVGKDVDSIIRDLAEIA 106