Pairwise Alignments

Query, 275 a.a., Small-conductance mechanosensitive channel from Echinicola vietnamensis KMM 6221, DSM 17526

Subject, 260 a.a., Conserved TM helix from Variovorax sp. SCN45

 Score = 80.5 bits (197), Expect = 3e-20
 Identities = 43/194 (22%), Positives = 91/194 (46%), Gaps = 2/194 (1%)

Query: 19  LKQIGDFLPRLFVFIVLLVMAWLIMRGLLFLIKKLLKLSKIDDLAENLSESDLFNH--IK 76
           L Q+G F+PRL V +V++ + WLI +   F + K L+    + L E     +      + 
Sbjct: 15  LYQVGAFIPRLLVALVVVFVGWLIAKAARFAVTKALRAINFNVLTERAGLDNFLRQGGLA 74

Query: 77  IKPSAIIMAFAKFFFVLLIIIFGADFLQLHAVSDEISKFLGYIPQVFVAIILFVLGVYLS 136
              S++    A +  +L  ++   + + L  ++D + + + ++P VFVA+++   G Y +
Sbjct: 75  GDTSSLFGILAYWLVILASLLIAFNGMGLSYIADLLGRIVWFVPNVFVALLVLAFGSYFA 134

Query: 137 IVVKKFIRELLRSFGWSGASVISNIVSYIILIIVSITALSQAGINTHVITDNLSLVLGAF 196
             V   +    R      A + + +  Y ++  V + AL Q  +   ++ ++  ++L   
Sbjct: 135 KFVGDAVGSYFRGVKMQDAMLFAKVAQYAVMAFVILIALDQIKVGGDIVRESFLVILAGV 194

Query: 197 LACFALAIGLGSRE 210
           +   ALA GL  ++
Sbjct: 195 VFALALAFGLAGKD 208