Pairwise Alignments

Query, 187 a.a., RNA polymerase sigma-70 factor, Bacteroides expansion family 1 from Echinicola vietnamensis KMM 6221, DSM 17526

Subject, 183 a.a., RNA polymerase sigma-70 factor, Bacteroides expansion family 1 from Echinicola vietnamensis KMM 6221, DSM 17526

 Score = 90.5 bits (223), Expect = 2e-23
 Identities = 55/176 (31%), Positives = 96/176 (54%), Gaps = 5/176 (2%)

Query: 4   LTDQKLYERIKDSDHSA--FQELFDRYWKKLFGFTFRMLQNVEQSEDIVQEIFLSLWEKA 61
           L  +K ++R   S HS   F+EL+  Y + +         + E +++IVQ++FLSLWE+ 
Sbjct: 3   LRSKKNHQRTARSVHSEKEFEELYTMYSRAMISMAHNRTGDREAAKEIVQDVFLSLWERR 62

Query: 62  P-LKDVAHIKSYLYSAVKYQVSSVIR--NQKWELDWDTIEGIYEVQVPTYDPLELEEVNR 118
             L+    IK YL+ AVK ++    R  N + +     +E        T + +   E++ 
Sbjct: 63  EGLRVHGSIKHYLFRAVKLEIIDHYRKKNSREKHQHYLVENAGRWSRSTEERVLFNELSG 122

Query: 119 FVEISIDTLPPKCKEIYCLQKEEGYTAKEIASNLNISPRTVEGHLHKAKKILKAKL 174
            +   ++ LP +C+E+Y L +E+G   KEIA +L ++ +TVE HL KA K L++++
Sbjct: 123 SISALVEKLPSQCREVYRLSREKGLNNKEIALSLTVTEKTVESHLTKALKFLRSRI 178