Pairwise Alignments

Query, 335 a.a., tripartite ATP-independent periplasmic transporter solute receptor, DctP family from Echinicola vietnamensis KMM 6221, DSM 17526

Subject, 330 a.a., TRAP-type C4-dicarboxylate transport system, periplasmic component from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  171 bits (434), Expect = 2e-47
 Identities = 106/319 (33%), Positives = 171/319 (53%), Gaps = 10/319 (3%)

Query: 8   HRPNFLVSILLFGLLVVSFSCQGPGSKRVIKLGHGL--DTKHPVHEAMLYMAKRLEEKSD 65
           HR NFL +I L  L + +        K VIKLG       + P         K LE  S 
Sbjct: 2   HRKNFL-AIGLTALALAAAPAAFAQQKAVIKLGWATADSPQDPSAVGAHAFKKALEATSK 60

Query: 66  GKLTMKVYPNAQLGNERELVELLQIGSLGMTKVSSAVMESFAPKIQVLSQPYLFRDNGHR 125
           G + ++++PN QLG+E+ ++E ++ G++    +++AV+    P  Q+   P+L+ +    
Sbjct: 61  GSIEVQLFPNRQLGDEKPMMEGMRFGTVDAAIITNAVVAQLEPGFQLNDLPFLYANEAQA 120

Query: 126 ERVLNGEIGKRLLNEGTQFWLKGLC---FYDAGSRSFYTKDKPVESPEDLVGKKIRVMES 182
            +VL+G +G  L   G +   KG+    F +AG R+     KPV SP D+ G K RVM++
Sbjct: 121 RKVLDGSVGAEL---GKRLEAKGITVLGFMEAGFRNMINNKKPVRSPADVAGVKYRVMQN 177

Query: 183 NTAINMVNSFGGSPTPVSWGELYTALQQGIVDGAENNPPSVISSRHYEICKFYSLDEHTA 242
              I+M NS GGS  P++WGE +TA+QQG +DG E     + S + YE+ K+ S   HT 
Sbjct: 178 PVFIDMFNSLGGSAVPMAWGETFTAVQQGAIDGLELPLAFIDSLKVYEVTKYLSQTNHTY 237

Query: 243 VPDMLIVSTKVWDRLSEEEQNWLQEAADESAKFQYKIWAEAEEESMRQLEAEGVTI-TRP 301
               L++  +   +LS E++  +Q+AA ++   Q K+  E  ++ +  L  +G+ + T  
Sbjct: 238 TTLELLIGNRALAKLSAEQRAAVQQAAAQAVAEQRKVSLENAQQMVAVLRGKGMQVNTVD 297

Query: 302 DKEPFRKAVEPMYEQIKQS 320
           D   FRKAV P+YE+ + S
Sbjct: 298 DPAAFRKAVAPVYEKFRGS 316