Pairwise Alignments

Query, 335 a.a., tripartite ATP-independent periplasmic transporter solute receptor, DctP family from Echinicola vietnamensis KMM 6221, DSM 17526

Subject, 343 a.a., TRAP-type C4-dicarboxylate transport system, periplasmic component from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  143 bits (360), Expect = 7e-39
 Identities = 80/292 (27%), Positives = 154/292 (52%), Gaps = 2/292 (0%)

Query: 34  KRVIKLGHGLDTKHPVHEAMLYMAKRLEEKSDGKLTMKVYPNAQLGNERELVELLQIGSL 93
           +R ++    L   HP+       A  + +KS GK+ + ++P A LG++ + +  ++ G+L
Sbjct: 35  ERTLRFAFSLAQDHPLGTGAKKFADAVAQKSGGKMKVALFPGAVLGSDPQNLSAIRGGTL 94

Query: 94  GMTKVSSAVMESFAPKIQVLSQPYLFRDNGHRERVLNGEIGKRLLNEGTQFWLKGLCFYD 153
             T +++ ++ S   +  V   P+LF +      + +G +G+RL+++     + GL  +D
Sbjct: 95  DFTSMATGLVASIDKQQMVFDLPFLFNNAQEAYAIADGPVGRRLMDDLAPHGVIGLGVWD 154

Query: 154 AGSRSFYTKDKPVESPEDLVGKKIRVMESNTAINMVNSFGGSPTPVSWGELYTALQQGIV 213
            G R      +P+   ED+ G KIRV+ S   I++  + G +P P+++GELY AL+   V
Sbjct: 155 LGFRHLTNSRRPIARQEDIQGLKIRVIASPIFIDLFTTLGANPVPMTFGELYGALESRTV 214

Query: 214 DGAENNPPSVISSRHYEICKFYSLDEHTAVPDMLIVSTKVWDRLSEEEQNWLQEAADESA 273
           DG +N    + S++  E+ KF SL  H      L++S K WD +SE E+  ++E+A+E+ 
Sbjct: 215 DGQDNPLGVIESAKFAEVQKFLSLSRHVYTGMPLLMSKKTWDGMSETERRIIRESAEEAK 274

Query: 274 KFQYKIWAEAEEESMRQLE--AEGVTITRPDKEPFRKAVEPMYEQIKQSQPE 323
           K Q +     E +++  L+   +   +  P+    R+ V+P+ ++  +   E
Sbjct: 275 KLQREATQAKEAQAIDGLKKTMQVNEVAAPELARLRQKVQPVVDKFSREVGE 326