Pairwise Alignments

Query, 335 a.a., tripartite ATP-independent periplasmic transporter solute receptor, DctP family from Echinicola vietnamensis KMM 6221, DSM 17526

Subject, 325 a.a., TRAP transporter substrate-binding protein from Pectobacterium carotovorum WPP14

 Score =  179 bits (454), Expect = 8e-50
 Identities = 88/289 (30%), Positives = 172/289 (59%), Gaps = 4/289 (1%)

Query: 47  HPVHEAMLYMAKRLEEKSDGKLTMKVYPNAQLGNERELVELLQIGSLGMTKVSSAVMESF 106
           +P   A+  M ++L+  ++G+L +K +P   LG+E++++E  Q+G++ + +VS   + + 
Sbjct: 38  YPNVVAVQKMGEKLKAATNGRLEIKTFPGGVLGDEKQMIEQAQLGAIDIIRVSMTPVAAI 97

Query: 107 APKIQVLSQPYLFRDNGHRERVLNGEIGKRL---LNEGTQFWLKGLCFYDAGSRSFYTKD 163
            P+I+V + PY+FRD  H  +VL+G+IG+ +   +   ++  L  L + DAG+R+  TK 
Sbjct: 98  LPEIEVFTLPYIFRDEDHLHKVLDGKIGQEIGDKITHSSKSKLVFLGWMDAGTRNLITK- 156

Query: 164 KPVESPEDLVGKKIRVMESNTAINMVNSFGGSPTPVSWGELYTALQQGIVDGAENNPPSV 223
           +PV  PEDL G KIRV  S  A+  + + G +   +   E+++ +Q G++DG ENNPP+ 
Sbjct: 157 QPVVKPEDLKGMKIRVQGSPVALATLKAMGANSIAMGVSEVFSGMQTGVIDGTENNPPTF 216

Query: 224 ISSRHYEICKFYSLDEHTAVPDMLIVSTKVWDRLSEEEQNWLQEAADESAKFQYKIWAEA 283
           ++  +  + K Y+   H  +P++ + S   WD+LS+E+Q+ + + A E+ + Q  +W E 
Sbjct: 217 VAHNYLPVVKNYTWSRHFIIPELFLYSKAKWDKLSKEDQDLILKLAKEAQQEQRVLWKEY 276

Query: 284 EEESMRQLEAEGVTITRPDKEPFRKAVEPMYEQIKQSQPEMYEIIEKIR 332
            ++S+ +++A GV     D E + KA +P+ +Q      ++ + +  ++
Sbjct: 277 TQQSLDKMKAGGVQFHDIDTEYYFKATQPVRDQFGAKYQDLIKAVADVQ 325