Pairwise Alignments

Query, 335 a.a., tripartite ATP-independent periplasmic transporter solute receptor, DctP family from Echinicola vietnamensis KMM 6221, DSM 17526

Subject, 327 a.a., C4-dicarboxylate-binding protein from Caulobacter crescentus NA1000 Δfur

 Score =  206 bits (524), Expect = 7e-58
 Identities = 105/288 (36%), Positives = 171/288 (59%), Gaps = 4/288 (1%)

Query: 47  HPVHEAMLYMAKRLEEKSDGKLTMKVYPNAQLGNERELVELLQIGSLGMTKVSSAVMESF 106
           +P  EA+ +    + ++++G+L ++ Y   QLG E++ +E+   G L + +V+ A +   
Sbjct: 39  YPTVEAVNHFGALISQRTNGRLRLQNYAGGQLGEEKDTLEITVFGGLDINRVNLAPLNPI 98

Query: 107 APKIQVLSQPYLFRDNGHRERVLNGEIGKRLLNEGTQFWLKGLCFYDAGSRSFYTKDKPV 166
            P   V S P+LF+   H  R L+G  G+ +LN   +  L GL FYD+G RSFY    P+
Sbjct: 99  EPLTLVPSLPFLFQSTDHMRRSLDGAPGRTILNSLERHGLIGLAFYDSGERSFYNTRGPI 158

Query: 167 ESPEDLVGKKIRVMESNTAINMVNSFGGSPTPVSWGELYTALQQGIVDGAENNPPSVISS 226
            +P D+ G K+RV  SN  I MV + G SP P+S+GE++ AL QG++DGAENN PS   S
Sbjct: 159 RTPADMRGLKLRVQTSNLPIAMVQALGASPIPMSYGEVFQALVQGVIDGAENNWPSYQDS 218

Query: 227 RHYEICKFYSLDEHTAVPDMLIVSTKVWDRLSEEEQNWLQEAADESAKFQYKIWAEAEEE 286
           RH+E+ +FYS+  H   P++L+ S + W +LS  ++  +++AA ES  F  ++W EA E 
Sbjct: 219 RHFEVARFYSVTRHVMAPEVLVASARTWAKLSSSDREIIRDAATESVPFMRRLW-EARET 277

Query: 287 SMRQ--LEAEGVTITRPDKEPFRKAVEPMYEQIKQSQPEMYEIIEKIR 332
           S RQ  ++A    +   D+  F+ A+ P++++   S P    ++ +IR
Sbjct: 278 SARQAMIDAGVEVVEDLDRSAFQAAMAPVWDRFITS-PAQTALVNQIR 324