Pairwise Alignments

Query, 456 a.a., Superfamily II DNA and RNA helicases from Echinicola vietnamensis KMM 6221, DSM 17526

Subject, 629 a.a., ATP-dependent RNA helicase DeaD from Escherichia coli ECOR27

 Score =  267 bits (683), Expect = 6e-76
 Identities = 150/387 (38%), Positives = 224/387 (57%), Gaps = 7/387 (1%)

Query: 6   FETFNFNESLQEGLDAMGFNKPTPIQQEAIPEILKGKDLIACAQTGTGKTAAFILPILHK 65
           F        + E L+ +G+ KP+PIQ E IP +L G+D++  AQTG+GKTAAF LP+L  
Sbjct: 8   FADLGLKAPILEALNDLGYEKPSPIQAECIPHLLNGRDVLGMAQTGSGKTAAFSLPLLQN 67

Query: 66  IAEKGDNQFNTLIIAPTRELAIQIDQQIQGLA-YFVGVSSIAIYGGGDGLVWEQQKKALE 124
           +  +       L++APTRELA+Q+ + +   + +  GV+ +A+YGG     ++ Q +AL 
Sbjct: 68  LDPELKAP-QILVLAPTRELAVQVAEAMTDFSKHMRGVNVVALYGGQR---YDVQLRALR 123

Query: 125 HGTEIVVATPGRLIALLAGGKIKLDTLEHLVLDEADRMLDMGFSDDILKIINYLPKNRQT 184
            G +IVV TPGRL+  L  G + L  L  LVLDEAD ML MGF +D+  I+  +P+  QT
Sbjct: 124 QGPQIVVGTPGRLLDHLKRGTLDLSKLSGLVLDEADEMLRMGFIEDVETIMAQIPEGHQT 183

Query: 185 VLFSATMPPKIRQFSKKIVTDPHEINIAISKTAE-GVTQRIYMAHDSQKESLLEHILTQK 243
            LFSATMP  IR+ +++ + +P E+ I  S T    ++Q  +     +K   L   L  +
Sbjct: 184 ALFSATMPEAIRRITRRFMKEPQEVRIQSSVTTRPDISQSYWTVWGMRKNEALVRFLEAE 243

Query: 244 NYEAVIVFASTKDKVKSIFKTLKKK-FKVEAFHSDLSQEERETIMSNFKNKTLKILIGTD 302
           +++A I+F  TK+    + + L++  +   A + D++Q  RE  +   K+  L ILI TD
Sbjct: 244 DFDAAIIFVRTKNATLEVAEALERNGYNSAALNGDMNQALREQTLERLKDGRLDILIATD 303

Query: 303 IISRGIDVEGIELVINYDTPSDPEDYVHRVGRTARADKKGEAITFVNEKDLFKLHKTQNL 362
           + +RG+DVE I LV+NYD P D E YVHR+GRT RA + G A+ FV  ++   L   +  
Sbjct: 304 VAARGLDVERISLVVNYDIPMDSESYVHRIGRTGRAGRAGRALLFVENRERRLLRNIERT 363

Query: 363 IGLEIPRVDLPEELGTGPEYREPNARK 389
           + L IP V+LP     G    E  A K
Sbjct: 364 MKLTIPEVELPNAELLGKRRLEKFAAK 390