Pairwise Alignments

Query, 456 a.a., Superfamily II DNA and RNA helicases from Echinicola vietnamensis KMM 6221, DSM 17526

Subject, 452 a.a., ATP-dependent RNA helicase RhlE from Dickeya dianthicola ME23

 Score =  278 bits (711), Expect = 3e-79
 Identities = 160/452 (35%), Positives = 261/452 (57%), Gaps = 23/452 (5%)

Query: 5   NFETFNFNESLQEGLDAMGFNKPTPIQQEAIPEILKGKDLIACAQTGTGKTAAFILPILH 64
           +FE+   +  +   ++  G+ +PTP+Q++AIP +L+G+DL+A AQTGTGKTA F LP+L 
Sbjct: 2   SFESLGLSADILRAVEEQGYREPTPVQRQAIPVVLEGRDLMASAQTGTGKTAGFTLPLLQ 61

Query: 65  KIAE-----KGDNQFNTLIIAPTRELAIQIDQQIQGLAYFVGVSSIAIYGGGDGLVWEQQ 119
            +++     KG      LI+ PTRELA QI + +   + ++ + S+ ++GG   +    Q
Sbjct: 62  LLSQRPSQAKGRRPVRALILTPTRELAAQIGENVLAYSQYLRLRSLVVFGG---VSINPQ 118

Query: 120 KKALEHGTEIVVATPGRLIALLAGGKIKLDTLEHLVLDEADRMLDMGFSDDILKIINYLP 179
              L  G +I++ATPGRL+ L     + L  +E LVLDEADRMLDMGF  DI +++  LP
Sbjct: 119 MMKLRSGVDILIATPGRLLDLEHQNAVDLSQVEILVLDEADRMLDMGFIHDIRRVLAKLP 178

Query: 180 KNRQTVLFSATMPPKIRQFSKKIVTDPHEINIAISKT-AEGVTQRIYMAHDSQKESLLEH 238
             RQ +LFSAT   +I++ + K++T+P  + +    T +E VTQ ++     +K  LL H
Sbjct: 179 SKRQNLLFSATFSDEIKELAGKLLTNPASVEVVRRNTPSELVTQHVHYVDKKRKRELLSH 238

Query: 239 ILTQKNYEAVIVFASTKDKVKSIFKTLKKK-FKVEAFHSDLSQEERETIMSNFKNKTLKI 297
           ++ + ++  V+VF  TK     + + L K      A H + SQ  R   ++NFK+  +++
Sbjct: 239 LIGKHDWRQVLVFTRTKHGANHLAEQLNKDGITAAAIHGNKSQGARTRALANFKDGDIRV 298

Query: 298 LIGTDIISRGIDVEGIELVINYDTPSDPEDYVHRVGRTARADKKGEAITFVNEKDLFKLH 357
           L+ TDI +RG+D++ +  V+NY+ P+ PEDYVHR+GRT RA+  GEA++ V   +   L 
Sbjct: 299 LVATDIAARGLDIDQLPHVVNYELPNVPEDYVHRIGRTGRAESTGEALSLVCVDEHKLLR 358

Query: 358 KTQNLIGLEIPRVDLPEELGTGPEYREP--NARK------GNAPSKGNFKKGTQKK-QKP 408
             + L+  EIPR+++           EP  N R+      G AP +G+  +G + +  +P
Sbjct: 359 DIERLLKREIPRMEIAGYEPDPTIKAEPIQNGRQGGRGGHGGAPRQGDRPQGGRPQGDRP 418

Query: 409 RNPRKN--VQNKATQ--TSKDSPKPNAKKPAS 436
             PR++      A Q    + + + + +KPAS
Sbjct: 419 HQPRRDGGASRPAGQRPEGQSARRRSPRKPAS 450