Pairwise Alignments

Query, 456 a.a., Superfamily II DNA and RNA helicases from Echinicola vietnamensis KMM 6221, DSM 17526

Subject, 454 a.a., ATP-dependent RNA helicase RhlE from Dickeya dadantii 3937

 Score =  276 bits (707), Expect = 8e-79
 Identities = 155/443 (34%), Positives = 247/443 (55%), Gaps = 12/443 (2%)

Query: 5   NFETFNFNESLQEGLDAMGFNKPTPIQQEAIPEILKGKDLIACAQTGTGKTAAFILPILH 64
           +FE+   +  +   ++  G+ +PTP+Q++AIP +L+G+DL+A AQTGTGKTA F LP+L 
Sbjct: 2   SFESLGLSADILRAVEEQGYREPTPVQRQAIPVVLEGRDLMASAQTGTGKTAGFTLPLLQ 61

Query: 65  KI-----AEKGDNQFNTLIIAPTRELAIQIDQQIQGLAYFVGVSSIAIYGGGDGLVWEQQ 119
            +       KG      LI+ PTRELA QI + +Q  + ++ + S+ ++GG   +    Q
Sbjct: 62  LLNGRPSQAKGRRPVRALILTPTRELAAQIGENVQAYSKYLRLRSLVVFGG---VSINPQ 118

Query: 120 KKALEHGTEIVVATPGRLIALLAGGKIKLDTLEHLVLDEADRMLDMGFSDDILKIINYLP 179
              L  G +I++ATPGRL+ L     + L  +E LVLDEADRMLDMGF  DI +++  LP
Sbjct: 119 MMKLRGGVDILIATPGRLLDLEHQNAVDLSHVEILVLDEADRMLDMGFIHDIRRVLAKLP 178

Query: 180 KNRQTVLFSATMPPKIRQFSKKIVTDPHEINIAISKT-AEGVTQRIYMAHDSQKESLLEH 238
             RQ +LFSAT   +I++ + K++T+P  + +    T +E VTQ ++     +K  LL H
Sbjct: 179 PKRQNLLFSATFSDEIKELAGKLLTNPASVEVVRRNTPSELVTQHVHFVDKKRKRELLSH 238

Query: 239 ILTQKNYEAVIVFASTKDKVKSIFKTLKKK-FKVEAFHSDLSQEERETIMSNFKNKTLKI 297
           ++ + ++  V+VF  TK     + + L K      A H + SQ  R   ++NFK+  +++
Sbjct: 239 LIGKHDWRQVLVFTRTKHGANHLAEQLNKDGITAAAIHGNKSQGARTRALANFKDGDIRV 298

Query: 298 LIGTDIISRGIDVEGIELVINYDTPSDPEDYVHRVGRTARADKKGEAITFVNEKDLFKLH 357
           L+ TDI +RG+D++ +  V+NY+ P+ PEDYVHR+GRT RA   GEA++ V   +   L 
Sbjct: 299 LVATDIAARGLDIDQLPHVVNYELPNVPEDYVHRIGRTGRAASTGEALSLVCVDEHKLLR 358

Query: 358 KTQNLIGLEIPRVDLPEELGTGPEYREP--NARKGNAPSKGNFKKGTQKKQKPRNPRKNV 415
             + L+  EIPR+++           EP  N R+G    +G   +   + Q  R  R   
Sbjct: 359 DIERLLKREIPRMEIAGYEPDPTIKAEPIQNGRQGGRGGRGGAPRQGDRPQGERASRPQG 418

Query: 416 QNKATQTSKDSPKPNAKKPASSS 438
                     + +P  ++P   S
Sbjct: 419 DRPHQPRRDGAARPAGQRPEGQS 441