Pairwise Alignments

Query, 240 a.a., Tetratricopeptide repeat. from Echinicola vietnamensis KMM 6221, DSM 17526

Subject, 829 a.a., TPR domain protein, putative component of TonB system from Variovorax sp. SCN45

 Score = 57.4 bits (137), Expect = 9e-13
 Identities = 40/162 (24%), Positives = 76/162 (46%), Gaps = 1/162 (0%)

Query: 4   INQGISLYKEGKFEEALEVFNQLLANTPNQPIILLHRGRVLSRMGKLELALEDFDLLLKT 63
           + QG++ ++ G+F EAL ++  LL+  P     L   G  L R G+ +LAL   +  +  
Sbjct: 21  LEQGLTQHRMGRFTEALRIYENLLSQFPEHADALHLTGEALYRQGRPKLALNYVNRAIAK 80

Query: 64  DQYNADFISDRAVVLHLLKRNEEALSELDRALNLDPNNPYRYSSRAFLKDRIGDLEGAIA 123
             ++  + + RA +   +    EA  +L RA+   PN P  Y + + +  +      A  
Sbjct: 81  SPHHF-YFNTRATIFMHMGLLAEAQQDLRRAIKALPNYPEAYVNLSAVYRQQKKFRQARE 139

Query: 124 DYEKAIEMDPEDAVSYNNKGIVEEKLGYKERSKKSFDKADKL 165
              +A  + P+   ++NN G ++ +    E + + F +A KL
Sbjct: 140 AAGEATRLAPQSPAAWNNAGAIDMEQDRLEEAVEQFRQALKL 181



 Score = 44.3 bits (103), Expect = 8e-09
 Identities = 39/162 (24%), Positives = 79/162 (48%), Gaps = 3/162 (1%)

Query: 37  LLHRGRVLSRMGKLELALEDFDLLLKTDQYNADFISDRAVVLHLLKRNEEALSELDRALN 96
           LL +G    RMG+   AL  ++ LL     +AD +      L+   R + AL+ ++RA+ 
Sbjct: 20  LLEQGLTQHRMGRFTEALRIYENLLSQFPEHADALHLTGEALYRQGRPKLALNYVNRAIA 79

Query: 97  LDPNNPYRYSSRAFLKDRIGDLEGAIADYEKAIEMDPEDAVSYNNKGIVEEKLGYKERSK 156
             P++ Y +++RA +   +G L  A  D  +AI+  P    +Y N   V  +     +++
Sbjct: 80  KSPHHFY-FNTRATIFMHMGLLAEAQQDLRRAIKALPNYPEAYVNLSAVYRQQKKFRQAR 138

Query: 157 KSFDKADKLVGYQPKEYKSTNA--PKENPVKKTPDQIPEQLK 196
           ++  +A +L    P  + +  A   +++ +++  +Q  + LK
Sbjct: 139 EAAGEATRLAPQSPAAWNNAGAIDMEQDRLEEAVEQFRQALK 180



 Score = 33.9 bits (76), Expect = 1e-05
 Identities = 16/60 (26%), Positives = 32/60 (53%)

Query: 5   NQGISLYKEGKFEEALEVFNQLLANTPNQPIILLHRGRVLSRMGKLELALEDFDLLLKTD 64
           N G + +++G+++ A+EV  + L   P Q +   + G      G+ E A+ +F+  L+ D
Sbjct: 304 NLGATNFRQGRYDAAIEVLKKALELHPRQVLARCNLGVTYVMAGQSEAAIAEFEQCLRDD 363



 Score = 33.1 bits (74), Expect = 2e-05
 Identities = 20/86 (23%), Positives = 41/86 (47%)

Query: 15  KFEEALEVFNQLLANTPNQPIILLHRGRVLSRMGKLELALEDFDLLLKTDQYNADFISDR 74
           +F+E+ E++   L + P Q  +L + G    R G+ + A+E     L+          + 
Sbjct: 280 RFDESEELYKLALESMPEQEALLNNLGATNFRQGRYDAAIEVLKKALELHPRQVLARCNL 339

Query: 75  AVVLHLLKRNEEALSELDRALNLDPN 100
            V   +  ++E A++E ++ L  DP+
Sbjct: 340 GVTYVMAGQSEAAIAEFEQCLRDDPD 365



 Score = 30.4 bits (67), Expect = 1e-04
 Identities = 45/183 (24%), Positives = 72/183 (39%), Gaps = 33/183 (18%)

Query: 5   NQGISLYKEGKFEEALEVFNQLL-------ANTPNQPIILLHRGRVLSRMGKLELALEDF 57
           N G    ++ + EEA+E F Q L       A   N   I  H+      +  LE A  D 
Sbjct: 157 NAGAIDMEQDRLEEAVEQFRQALKLDSGYIAAHKNIGKIRAHQKDWAGALTSLEQAQTD- 215

Query: 58  DLLLKTDQYNADFISDRAVVLHLLKRNEEALSELDRALNLDPNNPYRYSSRAF------- 110
                   + A ++  RA++     RNEEA++ + RA+    ++     +RA        
Sbjct: 216 -----PPDFEAAYLLSRALIA--CGRNEEAIAPMQRAMR---HSTVEVRARALSDPEAVA 265

Query: 111 -LKDRIGDLEGAIADYEK-------AIEMDPEDAVSYNNKGIVEEKLGYKERSKKSFDKA 162
            L      LEGA   +++       A+E  PE     NN G    + G  + + +   KA
Sbjct: 266 ALYGVCAALEGAAMRFDESEELYKLALESMPEQEALLNNLGATNFRQGRYDAAIEVLKKA 325

Query: 163 DKL 165
            +L
Sbjct: 326 LEL 328



 Score = 28.5 bits (62), Expect = 4e-04
 Identities = 36/163 (22%), Positives = 61/163 (37%), Gaps = 36/163 (22%)

Query: 7   GISLYKEGKFEEALEVFNQLLANTPNQPIILLHRGRVLSRMGKLELALEDFDLLLKT-DQ 65
           G +LY++G+ + AL   N+ +A +P+       R  +   MG L  A +D    +K    
Sbjct: 58  GEALYRQGRPKLALNYVNRAIAKSPHH-FYFNTRATIFMHMGLLAEAQQDLRRAIKALPN 116

Query: 66  YNADFISDRAVVLHLLK---------------------------------RNEEALSELD 92
           Y   +++  AV     K                                 R EEA+ +  
Sbjct: 117 YPEAYVNLSAVYRQQKKFRQAREAAGEATRLAPQSPAAWNNAGAIDMEQDRLEEAVEQFR 176

Query: 93  RALNLDPNNPYRYSSRAFLKDRIGDLEGAIADYEKAIEMDPED 135
           +AL LD      + +   ++    D  GA+   E+A + DP D
Sbjct: 177 QALKLDSGYIAAHKNIGKIRAHQKDWAGALTSLEQA-QTDPPD 218