Pairwise Alignments

Query, 240 a.a., Tetratricopeptide repeat. from Echinicola vietnamensis KMM 6221, DSM 17526

Subject, 728 a.a., tetratricopeptide repeat protein from Magnetospirillum magneticum AMB-1

 Score = 50.1 bits (118), Expect = 1e-10
 Identities = 54/209 (25%), Positives = 87/209 (41%), Gaps = 43/209 (20%)

Query: 6   QGISLYKEGKFEEALEVFNQLLANTPNQPIILLHRGRVLSRMGKLELALEDFDLLLKTDQ 65
           QGI   ++GK++EA   F  L   TPN P    + G  L   GK + A E    L++   
Sbjct: 11  QGIGALQQGKWDEAARQFRTLTGRTPNAPEPFYYLGVALLSGGKPDEAAETLTRLIRKHG 70

Query: 66  YN------------------------------ADFISDRAVVLHLL----KRNEEALSEL 91
            N                              A  +SD A  L  L    +R  EAL+ L
Sbjct: 71  DNPMALNALGSAQAASGKTGPAEKSFKRVLALAPDLSDAAENLARLLIESQRAAEALAPL 130

Query: 92  DRALNLDPNNPYRYSSRAFLKDRI---GDLEGAIADYEKAIEMDPEDAVSYNNKGIVEEK 148
              L+ +P    R +SR  L   +   G+LEGA+A+++  ++  P+ A + N+ G++   
Sbjct: 131 RSVLSREPG---RLASRHLLGRALRDTGELEGAMAEFQAVLKAQPDFAPALNDLGLLYFA 187

Query: 149 LGYKERSKKSFDKADKLVGYQPKEYKSTN 177
            G  E +   F   + L+   P ++ + N
Sbjct: 188 GGKGEDALACF---EHLLALNPADHVAAN 213



 Score = 41.6 bits (96), Expect = 4e-08
 Identities = 43/190 (22%), Positives = 78/190 (41%), Gaps = 40/190 (21%)

Query: 7   GISLYKEGKFEEALEVFNQLLANTPNQPIILLHRGRVLSRMGKLELALEDFDLLLKTDQY 66
           G++L   GK +EA E   +L+    + P+ L   G   +  GK   A + F  +L     
Sbjct: 46  GVALLSGGKPDEAAETLTRLIRKHGDNPMALNALGSAQAASGKTGPAEKSFKRVLALAPD 105

Query: 67  NADFISDRAVVLHLLKRNEEALSELDRALNLDPNNPYRYSSRAFLKDRI---GDLEGAIA 123
            +D   + A +L   +R  EAL+ L   L+ +P    R +SR  L   +   G+LEGA+A
Sbjct: 106 LSDAAENLARLLIESQRAAEALAPLRSVLSREPG---RLASRHLLGRALRDTGELEGAMA 162

Query: 124 DYEKAIE----------------------------------MDPEDAVSYNNKGIVEEKL 149
           +++  ++                                  ++P D V+ NN+ +    L
Sbjct: 163 EFQAVLKAQPDFAPALNDLGLLYFAGGKGEDALACFEHLLALNPADHVAANNRALTLRVL 222

Query: 150 GYKERSKKSF 159
              E +++ +
Sbjct: 223 NRPEEAEQQY 232



 Score = 38.1 bits (87), Expect = 5e-07
 Identities = 42/151 (27%), Positives = 69/151 (45%), Gaps = 3/151 (1%)

Query: 7   GISLYKEGKFEEALEVFNQLLANTPNQPIILLHRGRVLSRMGKLELALEDFDLLLKTDQY 66
           G +L   G+ E A+  F  +L   P+    L   G +    GK E AL  F+ LL  +  
Sbjct: 148 GRALRDTGELEGAMAEFQAVLKAQPDFAPALNDLGLLYFAGGKGEDALACFEHLLALNPA 207

Query: 67  NADFISDRAVVLHLLKRNEEALSELDRALNLDPNNPYRYSSRAFLKDRIGDLEGAIADYE 126
           +    ++RA+ L +L R EEA  +    L   P  P    +   L  R+G +  ++   E
Sbjct: 208 DHVAANNRALTLRVLNRPEEAEQQYRAILARHPQAPEVNLNLGKLLARMGRVMDSVPYLE 267

Query: 127 K--AIEMDPEDAVSYNNKGIVEEK-LGYKER 154
           K   IE    DA+   N+   E++ +G+++R
Sbjct: 268 KGGCIEARWWDALVLPNQYETEDEIIGWRKR 298



 Score = 32.3 bits (72), Expect = 3e-05
 Identities = 15/46 (32%), Positives = 29/46 (63%)

Query: 5   NQGISLYKEGKFEEALEVFNQLLANTPNQPIILLHRGRVLSRMGKL 50
           N+ ++L    + EEA + +  +LA  P  P + L+ G++L+RMG++
Sbjct: 214 NRALTLRVLNRPEEAEQQYRAILARHPQAPEVNLNLGKLLARMGRV 259