Pairwise Alignments

Query, 652 a.a., DNA gyrase, B subunit from Echinicola vietnamensis KMM 6221, DSM 17526

Subject, 806 a.a., DNA gyrase subunit B from Pseudomonas putida KT2440

 Score =  581 bits (1498), Expect = e-170
 Identities = 303/561 (54%), Positives = 398/561 (70%), Gaps = 15/561 (2%)

Query: 12  YSAGNIQILEGLEAVRKRPAMYIGDVGV-KGLHHLIWEVVDNSIDEALAGHCDTIHVTVL 70
           Y + +I++L+GL+AVRKRP MYIGD     GLHH+++EVVDNSIDEALAGHCD I V + 
Sbjct: 7   YDSSSIKVLKGLDAVRKRPGMYIGDTDDGSGLHHMVFEVVDNSIDEALAGHCDDITVIIH 66

Query: 71  EDNSVQVEDNGRGIPTDMHEKEKRSALEVVMTVLHAGGKFDKDTYKVSGGLHGVGVSCVN 130
            D S+ V DNGRGIP D+H++E  SA EV+MTVLHAGGKFD ++YKVSGGLHGVGVS VN
Sbjct: 67  PDESISVRDNGRGIPVDVHKEEGVSAAEVIMTVLHAGGKFDDNSYKVSGGLHGVGVSVVN 126

Query: 131 ALSTHLKATVYRNGKVFEQEYSRGVPQTGVTEIGETEKRGTIIHFVPDGDIFTVTEYKYE 190
           ALS  L  TV R+GK++EQ Y  GVPQ  +  +G++E  GT IHF P  + F    + ++
Sbjct: 127 ALSEKLVLTVRRSGKIWEQTYVHGVPQAPMAVVGDSETTGTHIHFKPSAETFKNIHFSWD 186

Query: 191 TIANRLREMAFLNAGVRIFFKDMRELDEEGNPKSDEFFS-EGGLIEFVEYLDETREKIIQ 249
            +A R+RE++FLN+GV I  KD R   EE       FF  EGGL  FVEYL+  +  +  
Sbjct: 187 ILAKRIRELSFLNSGVGILLKDERSGKEE-------FFKYEGGLRAFVEYLNTNKTPVNS 239

Query: 250 EPIYIESEKN-AVPVQVAMSYNSSFSENVVSYVNTINTYEGGTHVSGFRRALTRTLKGYA 308
           +  +   +++  V V+VA+ +N SF+EN++ + N I   +GGTH+ GFR +LTR+L  Y 
Sbjct: 240 QVFHFNVQRDDGVGVEVALQWNDSFNENLLCFTNNIPQRDGGTHLVGFRSSLTRSLNSYI 299

Query: 309 DKSGMLDKVKFDVSGDDFREGLTAVISVKVAEPQFEGQTKTKLGNSEVVSAVDSAVSEVL 368
           ++ G+  K K   +GDD REGLTA+ISVKV +P+F  QTK KL +SEV +AV+  +++  
Sbjct: 300 EQEGLAKKNKVATTGDDAREGLTAIISVKVPDPKFSSQTKDKLVSSEVKTAVEQEMNKYF 359

Query: 369 QYWLEEHPKEAKIIVGKVVLAAQARHAARKAREMVQRKNVLGGGGLPGKLADCANTNPEV 428
             +L E+P EAK +VGK++ AA+AR AARKAREM +RK  L   GLPGKLADC   +P +
Sbjct: 360 ADFLLENPNEAKAVVGKMIDAARAREAARKAREMTRRKGALDIAGLPGKLADCQEKDPAL 419

Query: 429 CELYLVEGDSAGGSAKQGRDRDFQAILPLKGKILNVEKAHEHKIYDNDEIKNILTALGVK 488
            ELYLVEGDSAGGSAKQGR+R  QAILPLKGKILNVEKA   K+  + E+  ++TALG  
Sbjct: 420 SELYLVEGDSAGGSAKQGRNRRTQAILPLKGKILNVEKARFDKMISSQEVGTLITALGCG 479

Query: 489 FGTAEDEKELDLTNLRYHKIVIMTDADIDGSHIRTLILTLFFRYMRSLIENGYVYIALPP 548
            G     +E ++  LRYH I+IMTDAD+DGSHIRTL+LT FFR +  L+E GY+YIA PP
Sbjct: 480 IG----REEYNIDKLRYHNIIIMTDADVDGSHIRTLLLTFFFRQLPELVERGYIYIAQPP 535

Query: 549 LYLLKKGKDERYCWSEDERIK 569
           LY +K+GK E+Y   +DE ++
Sbjct: 536 LYKVKRGKQEQYI-KDDEAME 555



 Score = 89.7 bits (221), Expect = 5e-22
 Identities = 42/61 (68%), Positives = 48/61 (78%)

Query: 585 IQRYKGLGEMNPEQLWTTTMDPESRTLKQVTIESAAEADHLFSMLMGDEVAPRREFIEKN 644
           IQRYKGLGEMNP+QLW TTMDP  R + +VTIE A  AD +F+ LMGD V PRR+FIE N
Sbjct: 738 IQRYKGLGEMNPDQLWETTMDPTVRRMLKVTIEDAIAADQIFNTLMGDAVEPRRDFIESN 797

Query: 645 A 645
           A
Sbjct: 798 A 798