Pairwise Alignments

Query, 652 a.a., DNA gyrase, B subunit from Echinicola vietnamensis KMM 6221, DSM 17526

Subject, 871 a.a., DNA gyrase subunit B (EC 5.99.1.3) from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  576 bits (1484), Expect = e-168
 Identities = 311/587 (52%), Positives = 401/587 (68%), Gaps = 38/587 (6%)

Query: 5   QASNLGEYSAGNIQILEGLEAVRKRPAMYIGDVGV-KGLHHLIWEVVDNSIDEALAGHCD 63
           QA     Y  G+IQILEGLEAVRKRP MYIGD     GLHHL++EVVDNSIDEALAGHCD
Sbjct: 31  QAGASEGYGEGSIQILEGLEAVRKRPGMYIGDTSDGTGLHHLVFEVVDNSIDEALAGHCD 90

Query: 64  TIHVTVLEDNSVQVEDNGRGIPT-----DMHEKEKRSALEVVMTVLHAGGKFDKDTYKVS 118
            I VT+  DNS+ V DNGRGIPT     D HE  KRSA E+ +T LHAGGKF++++YKVS
Sbjct: 91  DIVVTIHTDNSISVVDNGRGIPTGVKMDDKHEP-KRSASEIALTELHAGGKFNQNSYKVS 149

Query: 119 GGLHGVGVSCVNALSTHLKATVYRNGKVFEQEYSRGVPQTGVTEI-------------GE 165
           GGLHGVGVSCVNALS  L+ TV R G V + E++RG  Q  V E              G 
Sbjct: 150 GGLHGVGVSCVNALSQWLRLTVRREGHVHQLEFARGFVQNRVIETTPTGVEISPMRITGA 209

Query: 166 TEKRGTIIHFVPDGDIFTVT-EYKYETIANRLREMAFLNAGVRIFFKDMRELDEEGNPKS 224
           TEKRGT +HF+PD +IF    ++ YE ++ RLRE++FLN GVRI  KD R      + K 
Sbjct: 210 TEKRGTEVHFLPDYEIFRENADFHYEILSKRLRELSFLNNGVRIRLKDER------SGKE 263

Query: 225 DEFFSEGGLIEFVEYLDETREKIIQEPIYIESEKNA-----VPVQVAMSYNSSFSENVVS 279
           D+F   GG+  FV+++++ +  +     +   ++ +     + V+VAM +NS ++E V+ 
Sbjct: 264 DDFSGAGGVKGFVDFINKGKTVLHPNVFHAMGDRQSDQGTNIGVEVAMQWNSGYNEQVLC 323

Query: 280 YVNTINTYEGGTHVSGFRRALTRTLKGYADKSGMLDKVKFDVSGDDFREGLTAVISVKVA 339
           + N I   +GGTH++G R A+TR +  Y ++  +  K K +V+GDD REGL  V+SVKV 
Sbjct: 324 FTNNIPQRDGGTHLTGLRAAMTRVINKYIEEHELAKKAKVEVTGDDMREGLCCVLSVKVP 383

Query: 340 EPQFEGQTKTKLGNSEVVSAVDSAVSEVLQYWLEEHPKEAKIIVGKVVLAAQARHAARKA 399
           EP+F  QTK KL +SEV   V+  VS +L  +L+E P +AKII GK+V AA+AR AARKA
Sbjct: 384 EPKFSSQTKDKLVSSEVRGPVEDIVSRLLADYLQERPNDAKIICGKIVEAARAREAARKA 443

Query: 400 REMVQRKNVLGGGGLPGKLADCANTNPEVCELYLVEGDSAGGSAKQGRDRDFQAILPLKG 459
           REM +RK VL G GLPGKLADC   +P +CE+Y+VEGDSAGGSAKQGRDR FQAILPL+G
Sbjct: 444 REMTRRKGVLDGMGLPGKLADCQEKDPALCEIYIVEGDSAGGSAKQGRDRKFQAILPLRG 503

Query: 460 KILNVEKAHEHKIYDNDEIKNILTALGVKFGTA------EDEKELDLTNLRYHKIVIMTD 513
           KILNVEKA   K+  ++EI  ++TALG   G A          + ++  LRYH+I+IMTD
Sbjct: 504 KILNVEKARYEKLLTSNEILTLITALGTGIGKATGVGGTAGVDDFNVAKLRYHRIIIMTD 563

Query: 514 ADIDGSHIRTLILTLFFRYMRSLIENGYVYIALPPLYLLKKGKDERY 560
           AD+DG+HIRTL+LT F+R M  L+E G++YIA PPLY +K GK+E Y
Sbjct: 564 ADVDGAHIRTLLLTFFYRQMPELVERGHIYIAQPPLYKVKAGKEELY 610



 Score = 92.8 bits (229), Expect = 6e-23
 Identities = 44/60 (73%), Positives = 49/60 (81%)

Query: 586 QRYKGLGEMNPEQLWTTTMDPESRTLKQVTIESAAEADHLFSMLMGDEVAPRREFIEKNA 645
           QRYKGLGEMNPEQLW TTMDP  R L +V I+ A EAD +F+MLMGDEV PRR+FIE NA
Sbjct: 804 QRYKGLGEMNPEQLWETTMDPTVRRLLRVQIDDAIEADRVFTMLMGDEVEPRRDFIETNA 863