Pairwise Alignments

Query, 652 a.a., DNA gyrase, B subunit from Echinicola vietnamensis KMM 6221, DSM 17526

Subject, 803 a.a., DNA topoisomerase (ATP-hydrolyzing) subunit B from Dickeya dianthicola 67-19

 Score =  592 bits (1526), Expect = e-173
 Identities = 310/571 (54%), Positives = 403/571 (70%), Gaps = 11/571 (1%)

Query: 12  YSAGNIQILEGLEAVRKRPAMYIGDVGV-KGLHHLIWEVVDNSIDEALAGHCDTIHVTVL 70
           Y + +I++L+GL+AVRKRP MYIGD     GLHH+++EVVDN+IDEALAG+C  I VT+ 
Sbjct: 5   YDSSSIKVLKGLDAVRKRPGMYIGDTDDGTGLHHMVFEVVDNAIDEALAGYCKDIVVTIH 64

Query: 71  EDNSVQVEDNGRGIPTDMHEKEKRSALEVVMTVLHAGGKFDKDTYKVSGGLHGVGVSCVN 130
            DNSV V+D+GRGIPT +HE+E  SA EV+MTVLHAGGKFD ++YKVSGGLHGVGVS VN
Sbjct: 65  ADNSVSVQDDGRGIPTGIHEEEGVSAAEVIMTVLHAGGKFDDNSYKVSGGLHGVGVSVVN 124

Query: 131 ALSTHLKATVYRNGKVFEQEYSRGVPQTGVTEIGETEKRGTIIHFVPDGDIFT-VTEYKY 189
           ALS  L+  + R GKV  QEY  GVPQ  +   G+ +  GT + F P  + FT + E++Y
Sbjct: 125 ALSEKLELVIRREGKVHRQEYRHGVPQAPLGVTGDADATGTTVRFWPSLETFTNMVEFEY 184

Query: 190 ETIANRLREMAFLNAGVRIFFKDMRELDEEGNPKSDEFFSEGGLIEFVEYLDETREKIIQ 249
           + +A RLRE++FLN+GV I  +D RE +     K+D F  EGG+  FVEYL+  +  I  
Sbjct: 185 DILAKRLRELSFLNSGVSIRLRDEREEN-----KADHFHYEGGIKAFVEYLNRNKTPIHP 239

Query: 250 EPIYIESEKNAVPVQVAMSYNSSFSENVVSYVNTINTYEGGTHVSGFRRALTRTLKGYAD 309
           +  Y  +EK+++ V++AM +N  F EN+  + N I   +GGTH++GFR A+TRTL  Y D
Sbjct: 240 QVFYFSAEKDSIGVEIAMQWNDGFQENIYCFTNNIPQRDGGTHLAGFRAAMTRTLNNYMD 299

Query: 310 KSGMLDKVKFDVSGDDFREGLTAVISVKVAEPQFEGQTKTKLGNSEVVSAVDSAVSEVLQ 369
           K G   K K   +GDD REGL AV+SVKV +P+F  QTK KL +SEV SAV+S +++ L 
Sbjct: 300 KEGYSKKAKVSATGDDAREGLIAVVSVKVPDPKFSSQTKDKLVSSEVKSAVESLMNDRLV 359

Query: 370 YWLEEHPKEAKIIVGKVVLAAQARHAARKAREMVQRKNVLGGGGLPGKLADCANTNPEVC 429
            +L E+P +AKI+VGK++ AA+AR AARKAREM +RK  L   GLPGKLADC   +P + 
Sbjct: 360 DYLMENPNDAKIVVGKIIDAARAREAARKAREMTRRKGALDLAGLPGKLADCQERDPALS 419

Query: 430 ELYLVEGDSAGGSAKQGRDRDFQAILPLKGKILNVEKAHEHKIYDNDEIKNILTALGVKF 489
           ELYLVEGDSAGGSAKQGR+R  QAILPLKGKILNVEKA   K+  + E+  ++TALG   
Sbjct: 420 ELYLVEGDSAGGSAKQGRNRKNQAILPLKGKILNVEKARFDKMLSSQEVATLITALGC-- 477

Query: 490 GTAEDEKELDLTNLRYHKIVIMTDADIDGSHIRTLILTLFFRYMRSLIENGYVYIALPPL 549
           G   DE   D   LRYH I+IMTDAD+DGSHIRTL+LT F+R M  ++E G+V+IA PPL
Sbjct: 478 GIGRDEYNPD--KLRYHNIIIMTDADVDGSHIRTLLLTFFYRQMPEIVERGHVFIAQPPL 535

Query: 550 YLLKKGKDERYCWSEDERIKLTKEMAGDGKT 580
           Y +KKGK E+Y   ++   +    +A D  T
Sbjct: 536 YKVKKGKQEQYIKDDEAMDQYQIMLALDSAT 566



 Score = 95.9 bits (237), Expect = 6e-24
 Identities = 48/70 (68%), Positives = 55/70 (78%), Gaps = 1/70 (1%)

Query: 583 VGIQRYKGLGEMNPEQLWTTTMDPESRTLKQVTIESAAEADHLFSMLMGDEVAPRREFIE 642
           + IQRYKGLGEMNPEQLW TTMDPESR + +VT++ A  AD LF+ LMGD V PRR FIE
Sbjct: 733 LAIQRYKGLGEMNPEQLWETTMDPESRRMLRVTVKDAIAADELFTTLMGDAVEPRRAFIE 792

Query: 643 KNA-KYAKID 651
           +NA K A ID
Sbjct: 793 ENALKAANID 802