Pairwise Alignments

Query, 350 a.a., RNA polymerase sigma factor, sigma-70 family from Echinicola vietnamensis KMM 6221, DSM 17526

Subject, 319 a.a., sigma-70 family RNA polymerase sigma factor from Paraburkholderia sabiae LMG 24235

 Score = 88.6 bits (218), Expect = 2e-22
 Identities = 65/204 (31%), Positives = 103/204 (50%), Gaps = 6/204 (2%)

Query: 66  ERFRPLLFTYAYNILGAAMEAEDVVQDVFEKFLTLDTNTIQNEKAYLIRMVINQAINRKK 125
           E  R  LF  AY +LG+  EAEDVVQD + K+   D + +++  A+L  +    AI+R +
Sbjct: 13  EAVRAKLFALAYRMLGSRAEAEDVVQDAWLKWHAADASELRSSAAWLTTITTRLAIDRLR 72

Query: 126 QLNRSLLHYPNDWLPEPVITNM--DTERLEDEHI-LSYSMMLLLEQLEPGPRAVFLLKES 182
            L          W+P+P +  +    E L  + + +SY +MLLLE+L+P  RA F+L E+
Sbjct: 73  HLQIERTTRSGGWMPDPWLEGLAPSAEDLALQAVQMSYGVMLLLERLKPEERAAFVLHEA 132

Query: 183 FGYSHKAISQTLDISQETSRQQLSRAKKKLRNTTSP-QVIEPNREG--VEAYLKAIKNAD 239
           F   +  I++ L  +    RQ + RAK++L+    P +  +P      VE    A++  D
Sbjct: 133 FECDYAEIAKILAKTPANCRQMVHRAKERLQREGVPAKRADPAAHARIVERLRAAMEAQD 192

Query: 240 AKALEELLLEDISLTSDGGGKVPA 263
              L  L  +  S+ SD    V A
Sbjct: 193 RVGLVRLFCDVPSVISDAPETVDA 216