Pairwise Alignments

Query, 428 a.a., RND family efflux transporter, MFP subunit from Echinicola vietnamensis KMM 6221, DSM 17526

Subject, 402 a.a., efflux RND transporter periplasmic adaptor subunit from Paraburkholderia sabiae LMG 24235

 Score =  103 bits (258), Expect = 7e-27
 Identities = 98/414 (23%), Positives = 195/414 (47%), Gaps = 55/414 (13%)

Query: 14  GGVAGVLILFIIIGRALGWVGGAAETEVETT---KASKKTIVEKVSASGVIEPETEVKLS 70
           G V  +LIL +++G  L     A    VETT    A        ++A+G + P+ +  ++
Sbjct: 29  GAVVLILILALVVGLRL-----AGPQTVETTTVVSAFPSQSYTLLNATGYVVPQRKAAVA 83

Query: 71  PDVAGEIIELNISEGDSVKQNDLLVKIRPDNFISALDRTRANLNQQKANLAQSQAALKRS 130
               G +  L + EG  VK+++++ +I  ++  ++L + +A +   +ANLA  QA LK +
Sbjct: 84  SKAQGRLEWLGVLEGTRVKKDEVIARIESNDVAASLAQAKAQIKVAEANLALQQAELKNA 143

Query: 131 EALFDRAKLQYERNKSLYESNVISDSEFEQATADYVSAENDLKAAQQSVEAAEYVVKSSQ 190
           E       +   R+K L  +  I  ++++   A Y         A  S++ +   + S+Q
Sbjct: 144 E-------INLRRSKILAPNGAIPATQYDADVARY-------DKAVASIDNSRAAIVSAQ 189

Query: 191 ASVEEANENLRLTNVFAPTDGIVSKLLVEKGERVVGTQQMAGTE--MLRIADLSVMEVVV 248
           A+ + A   +  T + AP DG+V +     G+ +    Q + ++  ++ IAD++ +EV  
Sbjct: 190 ANAQAAQVAVDQTVIRAPFDGVVIEKHANVGDNITPFSQASDSKGAVVTIADMATLEVEA 249

Query: 249 DVNENDIVRISLGDTTIIEVDAYSHTGEKFTGVVTSIANSAN-EKATQDAVTEFEVEIRI 307
           DV E++I +I++     I++DA  +   +  G V+ I  + +  KAT        V++R 
Sbjct: 250 DVAESNIAKITVNAPCEIQLDALPNV--RLAGSVSRIVPTVDRSKAT------VLVKVRF 301

Query: 308 LNESYEKLITKENRYPFRPGMTASVEIITEKKADVLSVPLAAVTTRDDIRVDSTNAESDL 367
           ++     L          P M+A +  +++        P+ AV         +   E D 
Sbjct: 302 VDHDERVL----------PDMSAKIAFLSKPVPPEDRKPVVAVQ-------PNAIVERDG 344

Query: 368 QEIIFMSEGNKAHLTRVKTGISDFENIEILEGIKEGEELVSGPYFVVSKQLEDG 421
           ++++F+ + +  H   V TG +  E + + EG++ G+ LV  P    ++ ++DG
Sbjct: 345 RKVVFVVKDDIVHAVPVTTGAALGELVAV-EGVRPGDVLVRAP----NEHVKDG 393