Pairwise Alignments

Query, 913 a.a., ABC-type sugar transport system, periplasmic component from Echinicola vietnamensis KMM 6221, DSM 17526

Subject, 1186 a.a., HAMP domain-containing protein from Magnetospirillum magneticum AMB-1

 Score =  142 bits (358), Expect = 1e-37
 Identities = 131/477 (27%), Positives = 226/477 (47%), Gaps = 36/477 (7%)

Query: 329 QMEIYKNQRTFLFGFGLTLFVAIISLAYVFKSLREKQEI----NEELKNKNDEILQQKDK 384
           Q E  K     L   G  L VA   L    + L+ +QE     NEEL+ K+ E L+++ K
Sbjct: 446 QAEELKASEEELRAQGEALQVANEELRVSEEELKVQQEALQTANEELRLKS-EALEERGK 504

Query: 385 VLSLSKK--------AEEATQQKFDFFTNISHEFRTPLTLIQAPVEDLLANKDAAPFKPD 436
            L  ++          E+A++ K +F  N+SHE RTPL  +     DL A+ D      D
Sbjct: 505 ALEDARAEADRRALDVEQASRYKSEFLANMSHELRTPLNSVLILARDL-ADNDTGNMSDD 563

Query: 437 ----LQLIRKNTMRLLRLVNQLMDLRKIDHAKMKVKAVEQELIPFLQDILNSFDKTAQKH 492
                ++I ++   LL L+N ++DL K++  KM +  V   +   +Q I   F   A   
Sbjct: 564 QVESARVIHESGTHLLALINDVLDLSKVEAGKMTLDPVTIAIADLVQVIRGRFAPVATDK 623

Query: 493 DITLRLLADN---RNLKVWYDPMMLDKVMFNLLSNAFKFTPIHGSVIVKVTEKPLSNKVC 549
            +  ++  D    R+LK   D   ++++  NL+SNA KFT   G V V+++     + + 
Sbjct: 624 GLGFQVEVDPDLPRSLKA--DRGKIEQIANNLVSNAIKFTS-EGGVTVRLSLTGDGHVLA 680

Query: 550 IRVEDTGSGMSPEDTSHVFDRFYQGETYSA---AGSGIGLALSKELIELHHGEICLESTL 606
           + V DTG G++P+D   VF  F Q ++ ++    G+G+GL +S++L  L  G+I L++  
Sbjct: 681 LSVADTGIGIAPQDRQRVFAAFEQADSGTSRQFGGTGLGLTISRKLARLMGGDITLDANG 740

Query: 607 GKGTSFEVVLQMGKAHFNESEMLNGTATQYFSEENIGILEEVTPKISRDTQEEKEQTLLI 666
            KG+ F ++L +       +           +  +    E +      +T + + + LL+
Sbjct: 741 DKGSVFTLLLPLAGTTQLPAPRCAPEPRPASARPSPPAAEAI-----EETPKAEGKLLLV 795

Query: 667 IEDDQQIRQYLCQQLSAH-YNILEAENFEVGIAKALDKLPDLITCDLMLKQGSGFDIIKK 725
           IEDD   R+ +C    A  +    A + + G+  A  + P  +  D+ L   SG+++I+ 
Sbjct: 796 IEDDPIFRRVVCDMAQAKGFATATAGDGKTGLELARLRRPSGVVLDIGLPDMSGWEVIEA 855

Query: 726 LKDDIRTSHIPIIVITAKSSLDERIEGIKLGVDDYISKPFSFTLLLERIKTLLANRQ 782
           LK    T  IP+ V++A    DE     +LG   +++KP S   +    + LL  R+
Sbjct: 856 LKLQPETRDIPVHVMSAG---DEPGRAARLGTVGHLTKPVSREQINGAFEVLLRARR 909



 Score = 57.4 bits (137), Expect = 5e-12
 Identities = 38/124 (30%), Positives = 69/124 (55%), Gaps = 14/124 (11%)

Query: 662  QTLLIIEDDQQIRQYLCQQLSAH-YNILEAENFEVGIAKALDKLP-----DLITCDLMLK 715
            +T L+++DD +    L + L A    +L A++     AKAL +L      DL+  D+M+ 
Sbjct: 1059 RTALLVDDDMRNAFALSKVLRARGLKVLIAQDG----AKALSQLQSRADVDLVLMDIMMP 1114

Query: 716  QGSGFDIIKKLKDDIRTSHIPIIVITAKSSLDERIEGIKLGVDDYISKPFSFTLLLERIK 775
               G+  + +++ D R +H+PII +TAK+   +R   +  G DDY++KP      +ER++
Sbjct: 1115 GMDGYQTMGEIRKDPRFAHLPIIALTAKAMAGDRDRCLAAGADDYLTKPVD----VERLR 1170

Query: 776  TLLA 779
             ++A
Sbjct: 1171 QVMA 1174