Pairwise Alignments

Query, 457 a.a., DNA repair nuclease with dnaQ and GIY-YIG domains (from data) from Echinicola vietnamensis KMM 6221, DSM 17526

Subject, 201 a.a., DNA polymerase III PolC-type from Pseudomonas sp. DMC3

 Score = 87.4 bits (215), Expect = 4e-22
 Identities = 52/160 (32%), Positives = 83/160 (51%), Gaps = 2/160 (1%)

Query: 4   AIVDIETTG-GYGKRHRITEVAAVAHNGSQILDSFQTLINPDCEIPGFITGLTGIDQSMV 62
           A++D ETTG       R TE+A V     +I++ +Q+L+N    +P FI  LTGI  +M+
Sbjct: 5   AVIDFETTGLSPNSSCRATEIAVVMLENGRIVERYQSLMNAGVRVPAFIEQLTGISNAML 64

Query: 63  EGAPYFEDIADELYAFLEDKIFVAHNVNFDYQFIRSEFERIGKSFDRPKLCTVRLSRKIF 122
             AP  E + +E+  F+     +AHN +FD +F   E  RI ++  +   C++ L+R++ 
Sbjct: 65  RTAPPAERVMEEVNEFVGCTPLLAHNASFDQKFWDFELGRIKRTRLQNFACSLLLARRLM 124

Query: 123 PGLRSYSLGRICEHKNI-EIKSRHRAFGDAEATAELFTKL 161
           P   ++ LG +     +      HRA  DAE  A L   L
Sbjct: 125 PAAPNHKLGTLTTFARLPHTGQAHRAMADAEMAANLMAHL 164