Pairwise Alignments

Query, 406 a.a., ABC-type transport system, involved in lipoprotein release, permease component from Echinicola vietnamensis KMM 6221, DSM 17526

Subject, 402 a.a., hypothetical protein from Agrobacterium fabrum C58

 Score = 47.8 bits (112), Expect = 6e-10
 Identities = 53/226 (23%), Positives = 96/226 (42%), Gaps = 34/226 (15%)

Query: 196 EDFDDKII---------IGDIQTIRNLNGWENDQVGGFEV------FLKDPRLIDTKEEE 240
           +D DD II         IG   TI ++     D V   +V       L++ R I+   E+
Sbjct: 196 DDQDDTIIMPLKIHQRRIGGTTTISSIMVSAQDGVSTAKVQSDLQNLLRERRRINIGRED 255

Query: 241 LYEVIDYDLKVDKVTTMFIQIFDWLKLLNNNVYVFLGLILFVAAFNMIAILFILIMERTQ 300
                  D  V+ +T +   +     LL   +     + L V    ++ I+ + + ERT+
Sbjct: 256 -------DFTVNDMTQIASAMTGTTTLLTGLLGAVAAVSLLVGGIGIMNIMLVSVTERTR 308

Query: 301 MIGLLKAIGSTNRQIRGIFVWNGVRIIGRGMLIGNLIGLGIAWLQDLTHLISLDPANYYM 360
            IG+  AIG+  +Q+   F+   V +   G ++G L GLG+A+      ++S        
Sbjct: 309 EIGIRLAIGALEKQVLTQFLVEAVMLSAFGGIVGILTGLGLAY-----SVVS-------F 356

Query: 361 SYVPIQWNWPIVLGLNALILFVTTLVLFIPAMMISNVRPIKAIRFD 406
             VP   +  I+    A    +  +  + PA   +++ PI+A+R +
Sbjct: 357 LNVPFVTSPSIIFLAFAFSAAIGVIFGYFPARRAASLSPIEALRHE 402