Pairwise Alignments

Query, 575 a.a., RND family efflux transporter, MFP subunit from Echinicola vietnamensis KMM 6221, DSM 17526

Subject, 390 a.a., Secretion protein HlyD from Variovorax sp. SCN45

 Score = 95.9 bits (237), Expect = 3e-24
 Identities = 86/310 (27%), Positives = 135/310 (43%), Gaps = 33/310 (10%)

Query: 107 LSGTIEVDERNVKSVSANFDGRIDDLYVAFTGQEVKQGQRLARIYSPDLIAAHRELLEAK 166
           LS  +  DE     +     GRI D+ VA  G  VK GQ LA I SPD   A  +L +A+
Sbjct: 78  LSARVTYDEDVTARIGVGVSGRIVDIKVA-PGDTVKAGQVLAEIDSPDFGTAAADLDKAR 136

Query: 167 KATGISPKLYEAAKQ-------KLKQWQLTDAQITKMAND--------EDYQPH------ 205
                     E AK         +K+W+   + + +   +        ++  P       
Sbjct: 137 ADEERKRLAVERAKDLVSGDAIPVKEWESLQSDLAQARAETLRAGQRLKNLNPRGLAISG 196

Query: 206 --FDIYAATSGVVTDRKVAAGDYVSRGQV--LFEITNLNKVWVMLDAYEQGLGQISAGDQ 261
               + +   GVVTDR       VS G    LF +T+  ++W+M+D  E+ LG++     
Sbjct: 197 QRVKLTSPIDGVVTDRTATPALEVSPGMAAPLFVVTDPKRLWLMIDLPEKLLGRVRLKSD 256

Query: 262 IQFSVNALPGEEFSAKVAFIDPVVSADSRSAKVRAEVNNFSGKLKPGMFVTAKLSTQDEA 321
           +    +A PG++FSA++  +  VV  ++R A  RA + N   +L P MFV A +   +  
Sbjct: 257 VSVESDAFPGQQFSARIVQLGQVVDVNTRRATARAVLANPRTELLPEMFVRASVLQAE-- 314

Query: 322 PVDAGVMVPKSSILWTGRRSVVYRQVGSEMKPAFEMVQVELGPVAGEMQQVLTGLSPGDQ 381
               GV VP S+I+  G  + ++ Q   E    F   +V L    G+   V  GL   + 
Sbjct: 315 --GQGVRVPNSAIVNHGVYAYLFVQ---EAPGEFHRRKVALLTQGGDASYVGEGLKGSEL 369

Query: 382 IVTNGVFAVD 391
           +V  G   +D
Sbjct: 370 VVVKGALLLD 379