Pairwise Alignments

Query, 575 a.a., RND family efflux transporter, MFP subunit from Echinicola vietnamensis KMM 6221, DSM 17526

Subject, 384 a.a., Cobalt/zinc/cadmium efflux RND transporter, membrane fusion protein, CzcB family from Variovorax sp. SCN45

 Score =  109 bits (273), Expect = 2e-28
 Identities = 103/361 (28%), Positives = 160/361 (44%), Gaps = 51/361 (14%)

Query: 68  DSEDTNPYVMTMSPEAVALANIATS---TVKAGS------------EMASNH-LTLSGTI 111
           DS D N +  T++  A A   +      TV  GS            E AS H ++L  T+
Sbjct: 27  DSFDNNAHAATVAATAPAPMLVRQGNRLTVPEGSPLRDRLRVATVGEQASPHDVSLPATV 86

Query: 112 EVDERNVKSVSANFDGRIDDLYVAFTGQEVKQGQRLARIYSPDLIAAHRELLEAK----- 166
           E +  +  +V     G++ +L V   G  VK+GQ LA + SPDL  A  +  +A+     
Sbjct: 87  EANPASTVNVLPPLTGKLAELKVRL-GDTVKRGQVLATMTSPDLAQAVSDAQKARDALDL 145

Query: 167 ------KATGISPKLYEAAK----------QKLKQWQLTDAQITKMANDEDYQPH---FD 207
                 +A G++     AAK          Q+  + + ++ ++  +  D           
Sbjct: 146 AQRALVRARGVNEAGSNAAKDVEAAQSAVAQQTAELRRSETRLRSLGADGSGAQAGQLLK 205

Query: 208 IYAATSGVVTDRKVAAGDYVSRGQV-LFEITNLNKVWVMLDAYEQGLGQISAGDQIQFSV 266
           I A  SG VT    AAG  ++     L  + NL+ VWV ++  E  +G ++ G  +  S+
Sbjct: 206 IVAPISGTVTALNAAAGANLNDATATLMTVANLDSVWVTVNVPENVVGAVAPGQNVTVSL 265

Query: 267 NALPGEEFSAKVAFIDPVVSADSRSAKVRAEVNNFSGKLKPGMFVTAKLSTQDEAPVDAG 326
            A PG  F+ KV F+  V+ AD+R AK R    N  G  KP M+ TA L      P  A 
Sbjct: 266 AAFPGRRFTGKVGFVSAVLEADTRRAKARIVFANPEGLFKPNMYATAVLG----VPQAAQ 321

Query: 327 VMVPKSSILWTGRRSVVYRQVGSEMKP-AFEMVQVELGPVAGEMQQVLTGLSPGDQIVTN 385
             VP S++L       V+     E +P  F    VELG   G+  ++ +GL+ G+++V  
Sbjct: 322 PQVPASALLMNNDAVSVF----VEAEPWTFVRRMVELGREDGDQVRIRSGLNAGERVVVR 377

Query: 386 G 386
           G
Sbjct: 378 G 378