Pairwise Alignments

Query, 575 a.a., RND family efflux transporter, MFP subunit from Echinicola vietnamensis KMM 6221, DSM 17526

Subject, 385 a.a., CzcABC family efflux RND transporter, membrane fusion protein from Sphingobium sp. HT1-2

 Score = 92.0 bits (227), Expect = 4e-23
 Identities = 89/353 (25%), Positives = 147/353 (41%), Gaps = 33/353 (9%)

Query: 59  DLVPLSTLGDSEDTNPYVMTMSPEAVALANIATSTVKAGSEMASNHLTLSGTIEVDERNV 118
           D  P +     E      +T+S + +A A I T+    G    S  + L  TI+ D +  
Sbjct: 33  DAAPAAEAKAGEKAEEGKITLSADQIASAGIQTARPMMGG---SGTIELPATIDGDPQGT 89

Query: 119 KSVSANFDGRIDDLYVAFTGQEVKQGQRLARIYSPDLIAAHRELLEAKKATGIS------ 172
           + VSA   GR+  L     GQ + +GQ LA I S +  + + E   A+    ++      
Sbjct: 90  QVVSAAIGGRVVSL-TRNLGQSIGRGQTLAVIESREAASLNAETEAARARLSLANSNLAR 148

Query: 173 -PKLYE--------------AAKQKLKQWQLTDAQITKMANDEDYQPHFDIYAATSGVVT 217
             +L+               AA +     +L   Q++             I A  SG V 
Sbjct: 149 EQRLFSQRVSPEQDLIAARTAATEARIALRLAQQQVSAAGTGGGGLNRIGIVAPMSGQVI 208

Query: 218 DRKVAAGDYVSRGQVLFEITNLNKVWVMLDAYEQGLGQISAGDQIQFSVNALPGEEFSAK 277
            R V  G  V+    LF + NL+ V + L+   Q  G++  G  +        G + +AK
Sbjct: 209 GRSVVLGQTVAADAELFRVANLSSVSLSLNLQPQDAGRVRPGATVNIKA---AGRQATAK 265

Query: 278 VAFIDPVVSADSRSAKVRAEVNNFSGKLKPGMFVTAKLSTQDEAPVDAGVMVPKSSILWT 337
           V F+ P + A++R   V A ++N  G  + G  VTA ++       D  + VP +++   
Sbjct: 266 VTFVSPALDANTRLVPVIATLDNRDGLWRVGEPVTASVALTGSGG-DGAIRVPLTAVQTE 324

Query: 338 GRRSVVYRQVGSEMKPAFEMVQVELGPVAGEMQQVLTGLSPGDQIVTNGVFAV 390
             RSVV+ +     K  F+   V+LG  AG+   + +GL   ++I T   F +
Sbjct: 325 EGRSVVFVRT----KTGFQATAVQLGDSAGDSVIIKSGLKGTEEIATVNSFTL 373