Pairwise Alignments

Query, 575 a.a., RND family efflux transporter, MFP subunit from Echinicola vietnamensis KMM 6221, DSM 17526

Subject, 490 a.a., Probable copper RND efflux membrane fusion protein, CzcB family from Pseudomonas putida KT2440

 Score =  122 bits (307), Expect = 3e-32
 Identities = 93/358 (25%), Positives = 160/358 (44%), Gaps = 10/358 (2%)

Query: 41  MHPQIKQNEPGDCPICGMDLVPLSTLGDSEDTNPYVMTMSPEAVALANIATSTVKAGSEM 100
           M+PQ     PG  P   M LV       ++   P V  +S        +  +TV  G   
Sbjct: 49  MYPQQHFPAPGKSPFMDMQLVAKYAEEGTDPAEPAVQ-ISQGVQQNLGVRLATVSRGRLQ 107

Query: 101 ASNHLTLSGTIEVDERNVKSVSANFDGRIDDLYVAFTGQEVKQGQRLARIYSPDLIAAHR 160
            +  L +SG +  DER+   + A   G ++  Y   TG  V +G  LA + +P+      
Sbjct: 108 RT--LQVSGVLAFDERDFSVLQARTAGFVERTYGRATGDVVAKGAPLADVLAPEWAGLQE 165

Query: 161 ELLEAKKATGISPKLYEAAKQKLKQWQLTDAQITKMANDEDYQPHFDIYAATSGVVTDRK 220
           E L  +    +  +L  AA+Q+L    +    + ++A     Q    + A ++GV+    
Sbjct: 166 EFLALRHLGDV--QLLAAARQRLLLAGMPGELVDRVARSGKVQNQVTLVAPSAGVIQALD 223

Query: 221 VAAGDYVSRGQVLFEITNLNKVWVMLDAYEQGLGQISAGDQIQFSVNALPGEEFSAKVAF 280
           +  G  V+ G  L  I  +  VW+     E     +  G  ++  + A PGE    K+  
Sbjct: 224 LRPGMTVTPGATLARINGIANVWLEAAVPEAQASGLHEGQAVEAHLPAYPGETVQGKLTA 283

Query: 281 IDPVVSADSRSAKVRAEVNNFSGKLKPGMFVTAKLSTQDEAPVDAGVMVPKSSILWTGRR 340
           +       SR+ ++R E+ N  G+L+PGM  TA++S +     D  +++P  +++ TG+R
Sbjct: 284 LLADADLQSRTLRLRIELPNKDGRLRPGM--TAQVSLRPGENADDSLLLPAEAVIRTGKR 341

Query: 341 SVVYRQVGSEMKPAFEMVQVELGPVAGEMQQVLTGLSPGDQIVTNGVFAVDGAAQLSG 398
            +V   + +E +  F  ++V LG   G    +L GL  G ++V +G F +D  A L G
Sbjct: 342 DLV---MVAEDQGRFRPIEVVLGQENGGQVAILKGLQAGQKVVASGQFLIDSEASLKG 396