Pairwise Alignments

Query, 796 a.a., Mismatch repair ATPase (MutS family) from Echinicola vietnamensis KMM 6221, DSM 17526

Subject, 857 a.a., DNA mismatch repair protein MutS from Pseudomonas putida KT2440

 Score = 92.8 bits (229), Expect = 7e-23
 Identities = 88/407 (21%), Positives = 167/407 (41%), Gaps = 15/407 (3%)

Query: 116 YPQLFQLIGMVDLDNTLLRAIERVLNDKGKIKDNATRELGLIRGQIIYEENRLRKVLDRI 175
           YP+L  L+    +DN        V+ D G +K     EL  +   +   EN  + ++D  
Sbjct: 399 YPELASLLERAIIDNP-----PAVIRDGGVLKAGYDNELDEL---LAISENAGQFLIDLE 450

Query: 176 FREAKAKRLTPDDASITIRGGRMVMPVLAENKRKIKGFVHDESATGQTVFLEPAEVLDIN 235
            RE     L           G  +     + ++    ++  ++  G   F+ P E+    
Sbjct: 451 AREKARTGLANLKVGYNRVHGYFIELPTKQAEQAPGDYIRRQTLKGAERFITP-ELKAFE 509

Query: 236 NELKELEYMERREVQKILMQLTDTLRPFIPALRSAYKFLGMVDFIRAKARLALKMDAHKP 295
           ++    +       + +   L +TL   +  L+ +   L  +D +   A  AL +D + P
Sbjct: 510 DKALSAKSRALAREKMLYDALLETLISHLAPLQDSAAALAELDVLSNLAERALNLDLNCP 569

Query: 296 TLQKAKVIEWYNARHPVLEHALKQQQRPIVPLNIHLDHNSRLLVISGPNAGGKSVTLKTV 355
                  +     RHPV+E  L     P V  ++ LD+++R+L+I+GPN GGKS  ++  
Sbjct: 570 RFVDEPCLRIEQGRHPVVEQVLTT---PFVANDLGLDNSTRMLIITGPNMGGKSTYMRQT 626

Query: 356 SLVQYMLQCGLLVPMDPHSKCTVFHHFFIDIGDEQNIENDLSTYSSHLMSMKYFTQFADK 415
           +L+  +   G  VP     + ++    F  IG   ++    ST+   +         A  
Sbjct: 627 ALIVLLAHIGSFVPA-ASCELSLVDRIFTRIGSSDDLAGGRSTFMVEMSETANILHNATD 685

Query: 416 QTIFFIDEFGTGTEPQFGGAIAESILLALNKSGAYGIVTTHYGNLKQIAAKNQGMTNGAM 475
           +++  +DE G GT    G ++A +    L +  AY +  THY  L  +      + N  +
Sbjct: 686 RSLVLMDEVGRGTSTFDGLSLAWAAAERLAQLRAYTLFATHYFELTVLPESEPLVANVHL 745

Query: 476 RF--DIDKLEPMYQLDIGKPGSSFALEIATKIGIHKDIISYAKEQIG 520
                 +++  ++ +  G    S+ L +A   G+   +I  A+E +G
Sbjct: 746 NATEHNERIVFLHHVLPGPASQSYGLAVAQLAGVPTAVIQRAREHLG 792