Pairwise Alignments

Query, 662 a.a., ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain from Echinicola vietnamensis KMM 6221, DSM 17526

Subject, 593 a.a., SmdB family multidrug efflux ABC transporter permease/ATP-binding protein from Escherichia coli ECOR38

 Score =  159 bits (401), Expect = 5e-43
 Identities = 133/519 (25%), Positives = 235/519 (45%), Gaps = 25/519 (4%)

Query: 156 WRWFKELIKEDIPILTVAMTLGILMALAGLSTAIFSQKLIDDFLPNMETE-----KIAIG 210
           W   K L+    P     + + +LM     +  +    LI  F+ NM        K+  G
Sbjct: 8   WPTLKRLLAYGSP-WRKPLGIAVLMMWVAAAAEVSGPLLISYFIDNMVANNNLPLKVVAG 66

Query: 211 FAALALLLGLRAL-LGYIQGVFMARQGKELNIRLVKSFVQKIIRLPIPVLNGYSTGDLVA 269
            AA  + L L A  L Y Q +   R    +  +L    +   +R P+   +    G +++
Sbjct: 67  LAAAYVGLQLFAAGLHYAQSLLFNRAAVGVVQQLRTDVMDAALRQPLSEFDTQPVGQVIS 126

Query: 270 RM-NDSMRIRKTVALLTGNVAINVLVVLVSMGYIFHLSWPIGLVCLVGLVFFTVVGIRFH 328
           R+ ND+  IR     +   V  +  +V   +  +F L W + LV ++      VV + + 
Sbjct: 127 RVTNDTEVIRDLYVTVVATVLRSAALVGAMLVAMFSLDWRMALVAIMIFPVVLVVMVIYQ 186

Query: 329 KPILTFQKEVMQAHSQNEAQYLESLTGIHTVRSYSKEEVFKERINMVYEL-YQGKSYDLA 387
           +      + V    +     + E + G+  ++ + ++  F ER+       Y  +   L 
Sbjct: 187 RYSTPIVRRVRAYLADINDGFNEIINGMSVIQQFRQQARFGERMGEASRSHYMARMQTLR 246

Query: 388 IVANRFGFFTQLVSAVFLSLMFALGVWMIL----EGHLLLGELMAVLTVGGGIIPGAASL 443
           +     GF  + + ++F SL+   G+ M+      G + +G L A ++  G +      L
Sbjct: 247 LD----GFLLRPLLSLFSSLILC-GLLMLFGFSASGTIEVGVLYAFISYLGRLNEPLIEL 301

Query: 444 IIANIQLQEAKVAFDRLYEIASLEKENPGKDFGSKEKHSTKSDHQLTLEEVSFRFPGQKA 503
                 LQ+A VA +R++E+     + P + +G+ ++        + ++ VSF +     
Sbjct: 302 TTQQAMLQQAVVAGERVFELM----DGPRQQYGNDDRPLQSGT--IEVDNVSFAYRDDNM 355

Query: 504 ILNNINFSLGQGEMLALFGQVGSGKTTLVNLLQGFYMPEKGCLKIGDKPMDSWLMEHWRK 563
           +L NIN S+     +AL G  GSGK+TL +LL G+Y   +G +++  +P+ S      R+
Sbjct: 356 VLKNINLSVPSRNFVALVGHTGSGKSTLASLLMGYYPLTEGEIRLDGRPLSSLSHSALRQ 415

Query: 564 QVAVVSQTEKIFNTTILDNICLSHDVEEWRRCGEFLNQSGLERFFGQFDQGVMTLCGENG 623
            VA+V Q   +   T L N+ L  D+ E  R  + L    L         G+ T  GE G
Sbjct: 416 GVAMVQQDPVVLADTFLANVTLGRDISE-ERVWQALETVQLAELARSMSDGIYTPLGEQG 474

Query: 624 RNLSGGQRQLVAISRALYKQPKFLVLDEATSAMDFDTER 662
            NLS GQ+QL+A++R L + P+ L+LDEAT+++D  TE+
Sbjct: 475 NNLSVGQKQLLALARVLVETPQILILDEATASIDSGTEQ 513