Pairwise Alignments

Query, 568 a.a., PAS domain S-box from Echinicola vietnamensis KMM 6221, DSM 17526

Subject, 928 a.a., histidine kinase from Pseudomonas simiae WCS417

 Score = 92.4 bits (228), Expect = 7e-23
 Identities = 67/261 (25%), Positives = 125/261 (47%), Gaps = 23/261 (8%)

Query: 319 NISEEVIGEQKMSEALEKEIALNKMKSQFISITSHEFKTPLSTIKSSIEICNIELQRQLQ 378
           +IS     E  + +A +   A N+ K+ F++  SHE +TPL  +  ++E+        L 
Sbjct: 425 DISARTQIEAALEQARQSADAANEAKTLFLATMSHEIRTPLYGVLGTLEL--------LA 476

Query: 379 EHPSEQKFKKHFNRVNNEVDRMNSLLVNLLNLEKINQGVIQVSSKGKKINSYLRSVLEDW 438
               + + K + + +      +  L+ ++L++ KI  G + +      + + ++ V++ +
Sbjct: 477 RTRLDAQQKSYLHAIEGSSATLLQLICDVLDVSKIEAGQLALELSEFCVPTLVQEVVQGY 536

Query: 439 VD-------QDSVHFETTLPEDFIHSIDVSLMNQVITNLVENALKYGNRDEKVIVKAHHT 491
                    Q     +  LP   I   D S + Q++ NL+ NA+K+ +   +V+++    
Sbjct: 537 AAAAHSKGLQLYACLDPQLPRRLIG--DASRVRQILNNLLSNAVKFTDSG-RVVLRVKKL 593

Query: 492 DRE-----LVVSVRDFGDGIPEKEQEHLFKPFFRASNSSKYDKGSGLGLMITKKFIELQN 546
            RE     L   + D G GI   +Q  +F+PF+++  +S    G+GLGL I  +   L N
Sbjct: 594 GREGERVCLQWQISDTGKGIAPADQAFIFEPFYQSEGNSHVIAGTGLGLPICLRLTHLMN 653

Query: 547 GTVHFESEEGVGTCFFLTFPL 567
           GT+   SE G+G+ F LT PL
Sbjct: 654 GTLRMVSEPGLGSSFSLTVPL 674