Pairwise Alignments

Query, 568 a.a., PAS domain S-box from Echinicola vietnamensis KMM 6221, DSM 17526

Subject, 1215 a.a., histidine kinase from Pseudomonas simiae WCS417

 Score =  103 bits (256), Expect = 5e-26
 Identities = 96/375 (25%), Positives = 173/375 (46%), Gaps = 32/375 (8%)

Query: 215 ELLDMLVKHSSDMIGVFDVNWMPKYLSPSFEQAFGFTRNQLMDPSFFE---GFRSKVK-- 269
           E +  LV  +   I V D N + +  + S+ Q F   R  ++  S  +      ++    
Sbjct: 585 EFMRALVNETPHPIYVRDRNGLLQTCNDSYLQVFDVKREDVIGKSALQISTALETEASQY 644

Query: 270 --DMEKVVVDGVKRYRFTNLNSAGERIWLESIFDTLYDEDGEIQGHMAIMRNISEEVIGE 327
             D ++VV  G        L+  G+++ +        D  GE+QG +    +ISE     
Sbjct: 645 HADYQRVVAQGNPLIVDRPLHIRGKKLTIYHWILPYRDSTGEVQGIIGGWIDISERRQLF 704

Query: 328 QKMSEALEKEIALNKMKSQFISITSHEFKTPLSTIKSSIEICNIELQRQLQEHPSEQKFK 387
            ++  A E+    N+ KS F++  SHE +TP++ +   +E   + L+R  Q H      +
Sbjct: 705 DELRAAKERADEANRAKSTFLATMSHEIRTPMNAVIGMLE---LTLKRADQGHLDRPAIE 761

Query: 388 KHFNRVNNEVDRMNSLLVNLLNLEKINQGVIQVSSKGKKINSYLRSVLEDWVDQDSVHFE 447
             ++   + ++    L+ ++L++ +I  G + +S +   +   + SV+  +   D +  +
Sbjct: 762 VAYHSAKDLLE----LIGDILDIARIESGRLSLSPERVNLKDVIESVVRVF---DGLARQ 814

Query: 448 TTLP---------EDFIHSIDVSLMNQVITNLVENALKYGNRDE-KVIVKAHHTDR---- 493
            TL          +D    ID     QV++NLV NA+K+  R E KV V+ H TD     
Sbjct: 815 KTLSLLLEFKPGLDDTDVLIDPLRFKQVLSNLVSNAIKFTERGEVKVKVEVHATDLPQQV 874

Query: 494 ELVVSVRDFGDGIPEKEQEHLFKPFFRASNSSKYDK-GSGLGLMITKKFIELQNGTVHFE 552
           E+ + V D G GI  ++Q  LF+PF +A NS    + G+GLGL+I +    +  G +   
Sbjct: 875 EMKLVVEDTGIGISREDQLRLFEPFSQADNSGHLARSGAGLGLVICRSLCAMMGGQLSLS 934

Query: 553 SEEGVGTCFFLTFPL 567
           S   VGT  +++  +
Sbjct: 935 SVPMVGTQVYVSLKM 949