Pairwise Alignments

Query, 568 a.a., PAS domain S-box from Echinicola vietnamensis KMM 6221, DSM 17526

Subject, 883 a.a., histidine kinase from Pseudomonas simiae WCS417

 Score = 88.2 bits (217), Expect = 1e-21
 Identities = 63/234 (26%), Positives = 122/234 (52%), Gaps = 18/234 (7%)

Query: 342 KMKSQFISITSHEFKTPLSTIKSSIEICNIELQRQLQEHPSEQKFKKHFNRVNNEVDRMN 401
           +++S  ++  SH+ +TPL++++ SI+     L    +  P E + ++      +E +R++
Sbjct: 650 QLRSALLASVSHDLRTPLTSMRGSID----SLLALGEAIPLEDR-RELLEGTRDEAERLD 704

Query: 402 SLLVNLLNLEKINQGVIQVS----SKGKKINSYL---RSVLEDWVDQDSVHFETTLPEDF 454
             + NLL++ ++  G ++++    S G  + S L   R+VL        V  E  LP  +
Sbjct: 705 RYIQNLLDMTRLGHGALKLARDWVSPGDIVGSALGRLRAVLAPLKVSTDVPAE--LPLLY 762

Query: 455 IHSIDVSLMNQVITNLVENALKYGNRDEKVIVKAHHTDRELVVSVRDFGDGIPEKEQEHL 514
           +H+   +L+ Q + N++ENA ++     ++ + A   D +L  +V D G GIPE+E+  +
Sbjct: 763 VHA---ALIEQALVNVLENAARFSPPQGRLQLSAGVADDQLFFAVADEGPGIPEEERAKI 819

Query: 515 FKPFFRASNSSKYDKGSGLGLMITKKFIELQNGTVHF-ESEEGVGTCFFLTFPL 567
           F  F+ A+   +  +G+GLGL I +  +    G +   +  +G GTC  L  PL
Sbjct: 820 FDMFYTAARGDRGGQGTGLGLAICQGMVGAHGGHISVADGIDGRGTCITLFLPL 873