Pairwise Alignments

Query, 568 a.a., PAS domain S-box from Echinicola vietnamensis KMM 6221, DSM 17526

Subject, 884 a.a., sensor protein from Pseudomonas putida KT2440

 Score = 85.9 bits (211), Expect = 6e-21
 Identities = 64/235 (27%), Positives = 120/235 (51%), Gaps = 20/235 (8%)

Query: 342 KMKSQFISITSHEFKTPLSTIKSSIEICNIELQRQLQEHPSEQKFKKHFNRVNNEVDRMN 401
           +++S  ++  SH+ +TPL+ ++ SI+     L       P+E + ++      NE +R++
Sbjct: 650 QLRSALLASVSHDLRTPLTAMRGSID----SLLALGDAIPAEDR-RELLEGTRNEAERLD 704

Query: 402 SLLVNLLNLEKINQGVIQVSSK--------GKKINSYLRSVLEDWVDQDSVHFETTLPED 453
             + NLL++ ++  G ++++          G  +N  LR VL        V   T LP  
Sbjct: 705 RYIQNLLDMTRLGHGGLKLARDWVAPADIVGSALNR-LRVVLAPLRVHTDV--PTELPLL 761

Query: 454 FIHSIDVSLMNQVITNLVENALKYGNRDEKVIVKAHHTDRELVVSVRDFGDGIPEKEQEH 513
           F+H+   +L+ Q + N++ENA ++   + ++ ++    D +L ++V D G GIPE ++E 
Sbjct: 762 FVHA---ALIEQALVNVLENAARFSPANGRLELQVAVHDDQLRLTVSDQGPGIPEADREK 818

Query: 514 LFKPFFRASNSSKYDKGSGLGLMITKKFIELQNGTVHF-ESEEGVGTCFFLTFPL 567
           +F  F+ A+   +  +G+GLGL I +  I    G +   E  +G GT   L  PL
Sbjct: 819 IFDMFYTAARGDRGGQGTGLGLAICQGMIGAHGGQILVGEGIDGQGTSITLCLPL 873