Pairwise Alignments

Query, 482 a.a., Retron-type reverse transcriptase from Echinicola vietnamensis KMM 6221, DSM 17526

Subject, 473 a.a., Group II intron-encoding maturase from Pseudomonas putida KT2440

 Score =  338 bits (868), Expect = 2e-97
 Identities = 174/408 (42%), Positives = 271/408 (66%), Gaps = 2/408 (0%)

Query: 56  LMGKIVSPSNLVAALRQVVSNKGSAGIDGMSVEELRQWFSSHYHEFQSQIITGKYRVESV 115
           LM ++++P+NL  A ++VVSNKG+ G DG++V +L  +   ++   +++++ G+Y  ++V
Sbjct: 55  LMERVLAPANLRRAYQRVVSNKGAPGADGITVADLAGYVKQYWPTLKARLLAGEYHPQAV 114

Query: 116 REVQIPKPNGGVRILGIPTVKDRLVQQAISQVLSLHYDPTFSDRSYGFRPDRGAHDALRQ 175
           R V+IPKP GG R LGIP+V DRL+QQA+ Q L+  +DP FSD SYGFRP R  H A+  
Sbjct: 115 RAVEIPKPQGGTRQLGIPSVVDRLIQQALQQQLTPIFDPLFSDYSYGFRPGRSTHQAIEM 174

Query: 176 AGQEVSEGRDWIVDIDLEKFFDTVNHDRLMWLLGTRIGDKTLLKLIGKFLRAGMLKDGLV 235
           A   V+ G  W V+IDLEKFFD VNHD LM  +  R+ DK +L+LI ++L AG++  G+V
Sbjct: 175 ARAHVTAGHRWCVEIDLEKFFDRVNHDILMACIERRVKDKCVLRLIRRYLEAGIMSGGVV 234

Query: 236 SQGVKGMPQGSPLSPLLSNIILDELDKELEVRGHRFVRYADDLIVMVKSEPSAKRVLSSL 295
           S   +G PQG PLSPLLSNI+LDELD+ELE RGHRFVRYADD  + V+S  + +RVL S+
Sbjct: 235 SPRQEGTPQGGPLSPLLSNILLDELDRELERRGHRFVRYADDANIYVRSPRAGERVLVSV 294

Query: 296 TAFIEQRMLLKVNKSKSKISRPYELNFLGHSIL--IEGRLGLSKTSEQRLKAKLKQLTQR 353
             F+ +R+ L VN+ KS+++R ++ ++LG+ +    + RL +++ S  RL+ +L+ L + 
Sbjct: 295 ERFLRERLKLTVNRKKSQVARAWKCDYLGYGMSWHQQPRLRVARMSLDRLRDRLRMLLRS 354

Query: 354 NRGISLEQLVKELNPILRGWLNYFKNAQMIGRLKAIEGWLNRRIRCFRLKQCKRAFTMAK 413
            R   +  +++ +NP+LRGW +YFK +Q    L+ ++GW+  ++RC   +Q K+  T  +
Sbjct: 355 VRARKMATVIERINPVLRGWASYFKLSQSKRPLEELDGWVRHKLRCVIWRQWKQPPTRLR 414

Query: 414 LLHRLGVPWNRSWATAGSSKGWYRLSVTPAAHEAMNLKWFGTIGLYSL 461
            L RLG+   R+  +A + +G +  S     + A+  K +  +GL S+
Sbjct: 415 NLMRLGLSEERANKSAFNGRGPWWNSGAQHMNYALPKKLWDRLGLVSI 462